Gene Information

Name : BDP_0636 (BDP_0636)
Accession : YP_003360126.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Unknown
Product : SPOUT methyltransferase superfamily protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 735862 - 736236 bp
Length : 375 bp
Strand : -
Note : -

DNA sequence :
GTGGAGGTGGCGGATGAGAAGACGCCGGAGCACGCGGGCGAGGGCTTGGAACGCCAGATCAAGGCGAAGGAAGGCGAACG
CATCGCCAGGTATATCCGTGACGATGCGTTCGTCATCGCCTTGGCCATCGAAGGCAAGCAGCTCACCAGTGAGGAGCTGG
CCGCCAAAATCGACGGCCTCGGATTGCATGGCACCAGTCACATCCAGCTCATCATCGGCGGCTCGCTTGGCCTCGACCCG
TCGATTCTCCAACGTGCCGACTATCTGCTGAGCTTTTCCAGAATGACCTTCCCGCACCAGCTAATGCGCGTCATCCTGTT
GGAACAGATTTACCGCGCCTACAAAATCAACGCCGGCGAGCCCTACCACAAGTAG

Protein sequence :
MEVADEKTPEHAGEGLERQIKAKEGERIARYIRDDAFVIALAIEGKQLTSEELAAKIDGLGLHGTSHIQLIIGGSLGLDP
SILQRADYLLSFSRMTFPHQLMRVILLEQIYRAYKINAGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 2e-26 57
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 2e-27 53
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-27 53
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 6e-28 53
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 6e-28 52
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 6e-28 52
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 6e-28 52
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 6e-28 52
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 6e-28 52
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 6e-28 52
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 6e-28 52
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-27 52
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 6e-28 52
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 9e-28 52
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 6e-28 52
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 9e-28 52
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 6e-28 52
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 4e-27 51
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 1e-24 50