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Name : lysS (BDP_0513) Accession : YP_003360009.1 Strain : Bifidobacterium dentium Bd1 Genome accession: NC_013714 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 608111 - 609787 bp Length : 1677 bp Strand : + Note : - DNA sequence : ATGACTGAGACCAACGAATCCCAAGAACATCAGAATGAAGAGGCCCCCGTTCCCGTTATGACCACGGTAGAACGCGCCGA AATGCTGCTGCGGCAGGATGCCGCGATTCGCGCCAAAATCAACGACGGCGCGACCTTGGATGAGGCTGTGGATCCGAGCA ACAAGGAATTCGGCTCGCTGGCCCACCCGGAGCAGGTGCAGATGCGTGTGGCCAAGCGCGCCATGATGCTCAAGGAGGGT ATCGCGCCGTATCCGGTGACCCTCGATGTGACCGACACCATCGAAGCGGTGCGTGCCAAGTACGATGGCAAGCTCGAAGC GGGCGACGAGACCGAAGACGTGGTCGGCATCGCCGGCCGCGTGCTGTTCCTGCGCAATGCGGGCGGCCTGTGCTTCGTGC AGCTGTCCGCCGGCGACGGTACCAAGATTCAGGGCATGATCTCCAAGAAGGAGATCGGCGCCGACTCCCTCAAGCAGTTC AAGCAGCTGGTCGACCTTGGTGACCATCTGTTCATCAAGGGCCGTGTGATCGCCTCCAAGACCGGTGAACTGTCCGTGTT CGCCACCGAATGGGCCATCGCAGCCAAGGCATTGCAACCGCTGCCGGCCCTGCACAAGGACCTGAACGAAGACACTCGCA CCCGTAAGCCGTACATCGGCATGATCGCGGACGAGAAGATCCGCAACATGGTGCGCAACCGTTCCAAGGCCGTCGCCTCC CTGCGCAAGACCTTCGCCGACCATGACTTCATCGAGGTCGAGACTCCGATGCTGCAGACCGTGCACGGCGGTGCCGCCGC CCGTCCGTTCACCACGCACATGAACGCCTTCGACCTGGATCTTTACCTGCGCATCGCGCCGGAACTGTTCCTCAAGCGTT GCCTGGTAGGCGGCATTGACCGCGTGTTCGAAATCAACCGCGATTTCCGCAATGAAGGCGCCGACGCCACCCACGCCCCG GAATTCACCATGGTCGAGGCCTATCAGGCCTACGGCAATTACGACACCATCGGCGCACTCGTCAAGCAGCTCGTGCAGGA CACTGCCATGGACGTGTTCGGCAGCCACAAAGTGACCTTGCTCGACGGCACCGAATACGATCTCGGCGGCGAATGGAAGA CCATCAGCATGTACGATTCCCTATCCGAGGCGCTGGGCGAGGAAATCGTGCCGAACGGCGGCCCGGACAATCCGGGAACC TCCGTGGAACATTTGGGCGAGATCGCCGACAGGCTTGGCGTGGAACGCGACGACGTGGAGAACCACGGCAAGCTCGTCGA ACACCTGTGGGAGCACTTCTACGAAGACAAGCTGTACGAGCCGACCTTCGTGCGCGACTTCCCGGTCGAAACCTCCCCGC TGGTCAAAGGCCACCGCTCCAAGGCAGGCGTAGTCGAGAAGTGGGATCTGTACGTGCGTGGCTTCGAGCTGGCCACCGGC TACTCCGAGCTCAACGATCCGGTCGTGCAGCGCGAACGCTTCGTGGCTCAGGCCAAGGCGGCGCTCGCCGGCGATGAAGA GGCCTGTGACATTGACGAGGACTTCCTCGAGGCCCTTGGCGTCGGCATGCCCCCGGCAGGCGGCATGGGTATGGGCATCG ACCGACTGCTCATCGCACTGACCGGTGCCACCATCCGCGAGACCATCACCTTCCCGCTGGTGAAGCCGCTGAATTAA Protein sequence : MTETNESQEHQNEEAPVPVMTTVERAEMLLRQDAAIRAKINDGATLDEAVDPSNKEFGSLAHPEQVQMRVAKRAMMLKEG IAPYPVTLDVTDTIEAVRAKYDGKLEAGDETEDVVGIAGRVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQF KQLVDLGDHLFIKGRVIASKTGELSVFATEWAIAAKALQPLPALHKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVAS LRKTFADHDFIEVETPMLQTVHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEGADATHAP EFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGSHKVTLLDGTEYDLGGEWKTISMYDSLSEALGEEIVPNGGPDNPGT SVEHLGEIADRLGVERDDVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELATG YSELNDPVVQRERFVAQAKAALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-135 | 56 |
