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Name : BDP_0505 (BDP_0505) Accession : YP_003360002.1 Strain : Bifidobacterium dentium Bd1 Genome accession: NC_013714 Putative virulence/resistance : Unknown Product : ABC transporter permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : 3.6.3.44 Position : 598930 - 600747 bp Length : 1818 bp Strand : - Note : - DNA sequence : GTGGCAGATGACGTCGCCGACGAGTCCACGGCGCAAACCGGAGACAAGGCAAAGGCGGTGGAGGGCAAGGCCGCCTTGAA CAGAGCCATGAAGCCCATCCAAGGCAGGTTGAATTGCGGGCGCGCGCTGGCCGCGATCTCAGGTCTGCTGAGCGTAGCGC CCTACGCGGCGCTGGTAAGTATCGGAGACGTGCTGCTGCGCGCTTGGCAACAGCATACGCAGCCGGATGCGAACACCGTA TGGCGGTATGTGTTCATCCTGGTCGGCGCATACATGTTGCGCAGCTTCCTCTATTTCGCGGCATTGTCCATCACGCATTT CGCCGACTGCACGCTGGGTGCCGGCATTCGCCGAGCCATGGCGGATTCCCTTGGAAGGGCACCGCTTTCCACATTCAACG CATCGACATCCGGCATGATCCGCAAATCAATTCACGACGACGTGGAGACACTGCATGCACTGGTCGCGCACTGGCCGGTG GAAGGCACCGCGGCCACGGTGACGCCGCTTGCATTGTTCGCCTACATCGTAGTGCTGGACTGGCGTCTGGCCCTGCTCTC CATCGCCACGCTGCCCCTATACTTTGGCATTCAGATGTTCAGCATGGCCGGCATGAGCGAGAAGACCGCGCTGATGGACA CGAAGATCAGCAACGTGTCGAGTACGATGGTCGAATTCGCCAGTGGCATCGCCGTGGTAAAGGCATTCGGCCGCAGCGGC CATTCACTGCGGCAATACGAGCGCGCCGCCGACGACTTCATCAAACAGTACAACGATTGGTGCGGGCCGCTCGTTCGTTG GTGTGCGATCGCCGAGGCATTCATCGCCCCCGCCCTGCTTACCGCGATCAATCTCGCCGTCGGCATGCTGCTGGTACAGG CCGGCTATGTGACCGCGCCGCAAGTGTTGGCCGCCACGCTGACCGCCATGATGCTGCCATCCACCATCACCACGATCGGC AATATGCAGTGGAGCTATCAACTCGCCGGCGCTGCGGCATTGCGCATCGAACGGAATCTGCGCGTAACGCCGCTCGCCGA GACGACGCAACCGAAACATCCGAACGGCTACGACGTGGCCATCGACCATGTGACCTACGCCTACGGCCCCACCACGGCGC TTGACAACGTCAGTCTGAATGTCGCCGCAGGCACGATGACCGCACTCATCGGACCATCCGGATCCGGCAAATCCACGCTT GCCACGCTGATTGCCCGTTTTGACGATCCCGCCGAAGGATCGATCAGCATCGGCGGCGTCGATCTTCGCGACATCACCTC CGAGGAACTGTATCGCACCGTCGGTTTCGTACTCCAGGATCCGCAGCTAATCCGCGCATCGATTCGCGACAACATCGCAT TGGGGCGTCCTGACGCAACGCTGGAACAAATCCGCACCGCAGCCAAGGCCGCATTCATCGACGACGAAATCATGGCGCTC GAACACGGCTACGACACGGTGATCGATGGTCGGGTCGGCCTGTCCGGCGGACAGGAGCAACGTATCGCCATCGCCCGTGC GCTGCTGAAGGACACGCCGATCCTGATTCTCGACGAGGCCACGGCCAGCGTCGATCCGGAATCGGAAGCGCAGATTCAGC AGGCGTTGAACGCATTGGTCGCGGGCCGGACCGTAATCGTCATCGCACATAAGCCATCCGCCGTGGTGGGCGCCGATCAG ATGGTCGTCATGGATCGCGGCGAAATCGTCGCCTGCGGCACACACGAGCAACTTGCCGACGAAACGCACGTACGCGCGTT GGATGCCGTCGCACGACACAATCGAATCGCAGCACAGGAAGGCGCATACCATGCGTAA Protein sequence : MADDVADESTAQTGDKAKAVEGKAALNRAMKPIQGRLNCGRALAAISGLLSVAPYAALVSIGDVLLRAWQQHTQPDANTV WRYVFILVGAYMLRSFLYFAALSITHFADCTLGAGIRRAMADSLGRAPLSTFNASTSGMIRKSIHDDVETLHALVAHWPV EGTAATVTPLALFAYIVVLDWRLALLSIATLPLYFGIQMFSMAGMSEKTALMDTKISNVSSTMVEFASGIAVVKAFGRSG HSLRQYERAADDFIKQYNDWCGPLVRWCAIAEAFIAPALLTAINLAVGMLLVQAGYVTAPQVLAATLTAMMLPSTITTIG NMQWSYQLAGAAALRIERNLRVTPLAETTQPKHPNGYDVAIDHVTYAYGPTTALDNVSLNVAAGTMTALIGPSGSGKSTL ATLIARFDDPAEGSISIGGVDLRDITSEELYRTVGFVLQDPQLIRASIRDNIALGRPDATLEQIRTAAKAAFIDDEIMAL EHGYDTVIDGRVGLSGGQEQRIAIARALLKDTPILILDEATASVDPESEAQIQQALNALVAGRTVIVIAHKPSAVVGADQ MVVMDRGEIVACGTHEQLADETHVRALDAVARHNRIAAQEGAYHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 3e-121 | 50 |
