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Name : clpB (BDP_1996) Accession : YP_003361393.1 Strain : Bifidobacterium dentium Bd1 Genome accession: NC_013714 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.6.4.3 Position : 2263939 - 2266575 bp Length : 2637 bp Strand : - Note : - DNA sequence : ATGGAACAAAAGTTCACCACGATGGCGCAGGAAGCCATCGGAGACGCCATTCAAAGCGCGTCCGCGGCAGGTAACGCGCA AGTCGACACGTTGCATGTGATGGATGCGTTGCTGCGCCAGGAAAACGGTGTGATCCGCGGCCTCATCCAGGCTGCCGGCG GCGACGTGCAAGCCATCGGCGCTGCGGTGCGCAACGCCTTGGTCGCGTTGCCGGCTGCCAGCGGTTCGACCACATCGCAG CCGCAGGCAAGCCGTCAGCTGACCGCCGCGATCGCGCAGGCCGAAAAGGAAATGCAGGCGATGGGCGACGAATACGTCTC CACCGAACACCTGCTCATCGGCATCGCGGCAAGCAAGCCGAACCAATCCGCGGAAATCCTTGAAAAGAACGGCGTGACCG CCGAAGCGCTGCGCAAGGCGGTGCCGGGCGTGCGTGGCGGCGCGAAAGTGACCAGCCCCGACGCGGAAAGATCGTACAAG GCGCTCGAAAAGTATTCCACCGACCTGACGGCCGCCGCGAAAGACGGCAAGCTCGACCCCGTGATCGGCCGCGATCAAGA GATCCGCCGCGTCATCCAGATCCTGAGCCGGCGCACCAAGAACAATCCGGTGCTCATCGGCGAGCCGGGCGTCGGCAAAA CCGCCGTCGTGGAAGGTCTGGCGCAGCGCATCGTCGCCGGTGACGTGCCGACCACCCTGCAGAACAAGAAGCTGATCTCG CTCGACCTCGGCTCCATGGTCGCGGGCTCCAAGTATCGCGGCGAATTCGAGGAACGACTGAAGAGCGTGCTCGAGGAGAT CAAGAAGTCTGACGGGCAGATCATCACCTTCATCGACGAAATCCACACCATCGTCGGTGCGGGCGCCGCCGAAGGCTCCA TGGACGCAGGCAATATGCTCAAGCCCATGCTGGCCCGCGGCGAACTACGCCTGATCGGTGCGACCACGCTCGACGAATAT CGAGAGAACGTCGAAAAGGATCCGGCACTGGAACGCCGCTTCCAACAGGTCTTCGTCGGCGAACCGAGCGTGGAAGACAC GATTGCGATCCTGCGTGGTCTGAAGCAACGTTACGAGGCGCACCACAAGGTGACGATCGGCGACGATGCGCTGGTCGCCG CCGCAACCCTGTCGAACCGGTATATCTCCGGCCGCCAGCTGCCCGACAAGGCCATCGACCTGGTCGACGAGGCAGCCGCG CACCTGCGTATGGAACTCGACTCCTCGCCGGAGGAAATCGACGAACTGCAACGCAAGGTGACCCGCTACGAAATGGAGGA GATGCAGCTCAAGAAGGCCGAAGACCCCGCTTCGAAGGACCGCCTCGAGAAGCTGCAGGCCGATCTGGCGGACGCCCGCG AAAAGCTGAGCGGCCTCAAGGCACGTTGGGATGCGGAAAAGGCCGGCCACAACAAGGTCGGCGATTTGCGAGCCAAGCTC GACGACCTGCGCGTAGAAGCCGACAAGGCCATGCGCGAAGGCGACCTGGAGAAGGCCAGCCGCATCTCGTACGGCGAGAT CCCCGCGATTCAGAAGGAACTGGCCGCAGCGGAAGCCGCCGCCGACAACAATGACGCGAACGGCACCGCGGTCGCCGAAA CCGAACCGATGGTGCCCGACCACGTCGATGCCGATTCCGTGGCCGGCATCGTATCCGAATGGACCGGCATCCCGGTCGGC CGCCTCATGCAAGGCGAGAATGAAAAGCTCCTGCACATGGAGGAGTATCTCGGCAAGCGTGTGATCGGCCAGAAGGAAGC CATCGCAGCGGTTTCGGACGCCGTGCGGCGCTCGCGTGCCGGCATCTCCGACCCGAATCGTCCGACCGGCTCGTTCCTGT TCCTAGGCCCCACCGGCGTGGGCAAGACCGAACTGGCCAAGGCGCTCGCGGACTTCCTGTTCGACGACGAGAAGGCCATG GTGCGCATCGACATGAGCGAATACATGGAAAAGGCCTCCGTGTCTCGCCTGATCGGCGCCGCGCCGGGCTACATCGGCTA CGAGGAGGGCGGCCAGCTCACCGAGGCCGTACGCCGCCGTCCATACTCGGTGGTGCTGTTCGACGAGGTGGAGAAAGCCA ATCCGGAAGTATTCGACGTGCTGCTGCAAGTGCTCGACGATGGCCGTCTGACCGATGGTCAGGGCCGTACCGTGGACTTC AAGAACACGATTCTGATCATGACCTCCAATTTGGGGTCGCAATTCCTCGTCAATCCGGACTTGGATGCGGACGCCAAGAA GAAGGCCGTGATGGATGCCGTGCACATGCAGTTCAAGCCGGAATTCATCAACCGCTTGGACGAGCTGGTCATGTTCCACC CGCTCACCCGTGAGGAACTGGGCGGCATCGTGGACATCCAGGTGGCGCAGGTCTCCGCTCGCCTGACCGAGCGTCGCATC ACGCTCGATGTGACCGATTCGGCACGCGAATGGCTGGCCAACACCGGCTACGATCCGGCGTATGGCGCTCGCCCGCTGCG TCGCCTGGTGCAGACCGAGGTCGGCGATCAGCTGGCGCGCATGCTGCTGGCTGGCCAGGTGCATGACGGCGACACCGTGT TGGTGGATCAGACCGGCGGCGATCATCTCGAACTGTCCGCATGGGCGAGCGATCAACTGGCGGACATGGGCAAGTAA Protein sequence : MEQKFTTMAQEAIGDAIQSASAAGNAQVDTLHVMDALLRQENGVIRGLIQAAGGDVQAIGAAVRNALVALPAASGSTTSQ PQASRQLTAAIAQAEKEMQAMGDEYVSTEHLLIGIAASKPNQSAEILEKNGVTAEALRKAVPGVRGGAKVTSPDAERSYK ALEKYSTDLTAAAKDGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLIS LDLGSMVAGSKYRGEFEERLKSVLEEIKKSDGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEY RENVEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAA HLRMELDSSPEEIDELQRKVTRYEMEEMQLKKAEDPASKDRLEKLQADLADAREKLSGLKARWDAEKAGHNKVGDLRAKL DDLRVEADKAMREGDLEKASRISYGEIPAIQKELAAAEAAADNNDANGTAVAETEPMVPDHVDADSVAGIVSEWTGIPVG RLMQGENEKLLHMEEYLGKRVIGQKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAM VRIDMSEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDF KNTILIMTSNLGSQFLVNPDLDADAKKKAVMDAVHMQFKPEFINRLDELVMFHPLTREELGGIVDIQVAQVSARLTERRI TLDVTDSAREWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGQVHDGDTVLVDQTGGDHLELSAWASDQLADMGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-104 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-106 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003361393.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 3e-110 | 43 |
| clpB | YP_003361393.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 3e-116 | 41 |
