Gene Information

Name : pdxS (BDP_1914)
Accession : YP_003361318.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2173987 - 2174862 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAACAACAGAAATGAACTGAATAAGAATCTGGCGCAGATGCTCAAGGGCGGCGTGATCATGGACGTCACCACTCC
GGAGCAGGCGAGGATCGCGCAGGATGCCGGCGCGTGCGCGGTGATGGCGCTCGAGCGCATCCCGGCTGACATCCGCGCCG
CCGGTGGCGTCTCCCGCATGAGCGATCCGGCCATGATCAAAGGCATTCAGGAAGCCGTGTCCATTCCGGTCATGGCCAAG
GTGCGCATCGGCCACATCGCCGAGGCGCGCATTCTGCAGGCCATCGAAATCGACTATATCGACGAATCCGAAGTGCTCAG
CCCGGCCGATGACGTGTATCACATCGATAAGAATCAGTTCGACGTGCCATTCGTGTGCGGTGCGAAGAATCTGGGTGAAG
CGTTGCGACGTATCGCCGAGGGTGCATCCATGATCCGTACCAAGGGCGAACCGGGCACGGGCGACGTCATCCAGGCCGTA
CGCCATATGCGCACCATGAACAAGCAGATTCGCGAGCTCGTCTCCCTGCGCGACGACGAGATGTACGAGGCGGCCAAGCA
GCTGGCCGTGCCGTATGACCTGGCCAAGTATGTGCATGACAACGGCCGCCTGCCGGTCGTCAACTTCGCCGCAGGCGGTG
TCGCGACCCCGGCTGACGCGGCCCTCATGATGGAGCTTGGCGCGGAAGGTGTGTTCGTGGGCTCCGGCATCTTCAAGTCC
GGCGACCCGGCCAAGCGCGCCGCCGCCATCGTGCAGGCCACCGCCAACTGGCAGGACGCCGACCTGCTTGCGCGCCTGTC
CGAGAATCTCGGCGAGGCCATGGTCGGCATCAATGAGGACGAGATCGAGACCATCATGGCCGCCAGGGGTGAGTGA

Protein sequence :
MANNRNELNKNLAQMLKGGVIMDVTTPEQARIAQDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAK
VRIGHIAEARILQAIEIDYIDESEVLSPADDVYHIDKNQFDVPFVCGAKNLGEALRRIAEGASMIRTKGEPGTGDVIQAV
RHMRTMNKQIRELVSLRDDEMYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS
GDPAKRAAAIVQATANWQDADLLARLSENLGEAMVGINEDEIETIMAARGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-80 68
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-80 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-80 68