Gene Information

Name : BDP_1874 (BDP_1874)
Accession : YP_003361280.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3764
EC number : -
Position : 2140506 - 2141441 bp
Length : 936 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGCAGGGGGACCTTCGGGTTCCCCTGCTTTTGCCGTGTCCGGTACCAAAAAACGCTTGAGACGAAGGCGCCGTCT
GCGACTTGCCGCCGCCAGTCTGATTCTGCTAGCGGGGCTTGCGCTGATAAGCTACCCATTCGTCAGTGACTGGCTTAATC
AGCGTGCGCAGGATGCTGTGAGCAATACTCAGCAGCAGACGGTCGCTGCCTTGAAACCCGCGGATCTCTCCGCGGAAAAG
GCGAAGGCGGAAGCATACAACGCCCATTTGCGCGACGGTAGTTCGCGAGTGGTCGACCCTTTCGACCAAGATGATGCTTC
CCCTGGCAACGACGAGTACGAGAGTGTGCTCAACGTCGCCGGTGATGGAGTCATGGCGGAGCTGATCATTCCTTCCATCA
GCGTTGACCTGCCCATCTACCACTACACCACAGAGGAGCCGCTTTCGCATGGAGTGGGACATGTGGTGAACACTTCGGTA
CCCATCGGAGGTGACTCCACCCATAGTGTTCTGGCCGGGCATACGGGGCTTCCTACGGCGCGACTGTTCGATCGGCTTGA
CGAACTCAAGAAGGGTGATTGGTTCATCATCCGCGTTTTGGGGGAGGATCATGCCTATAAGGTCTATTCCACCGAAGTCG
TGCTGCCGAGTGAGGTGGATAGCCTCACTACGGAGGAGGGCCGCGATCTGGTGACGCTCGTGACCTGTACGCCCTACGGT
GTGAACACCCATCGTCTGCTCGTCCATGCCGAACGCACCACGGTGCCCGCGGGATGGAATGCCTCCGAAAGACCATCCGT
ACGTTCCGTGACGCCGCCTGCCGAGTTGCCGCGTCATCTTTGGGTCTATGCGATTGCCGGGGCGTTGGCCGCCATCGGTA
TTCTCGTGGTTGCGTGCCTGGTCGGCTGGATTCGCAAGCGCCGGAAGCGTACCTGA

Protein sequence :
MKAGGPSGSPAFAVSGTKKRLRRRRRLRLAAASLILLAGLALISYPFVSDWLNQRAQDAVSNTQQQTVAALKPADLSAEK
AKAEAYNAHLRDGSSRVVDPFDQDDASPGNDEYESVLNVAGDGVMAELIIPSISVDLPIYHYTTEEPLSHGVGHVVNTSV
PIGGDSTHSVLAGHTGLPTARLFDRLDELKKGDWFIIRVLGEDHAYKVYSTEVVLPSEVDSLTTEEGRDLVTLVTCTPYG
VNTHRLLVHAERTTVPAGWNASERPSVRSVTPPAELPRHLWVYAIAGALAAIGILVVACLVGWIRKRRKRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-36 45
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-30 43