Gene Information

Name : BDP_1711 (BDP_1711)
Accession : YP_003361126.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Unknown
Product : L-fucose permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0738
EC number : -
Position : 1934327 - 1935778 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
ATGACACGGCCAATCGATGCACAAACGATCGACGCCACCAGCCCCACCAGCCCCAACGCCTCCGCAGAACCTGCTTCCGA
CGGCGCACAGCCGAAAAAACAACGTTGGATTGAATTCCCCGACGGCTATCTCAACCGTACGCCGGTGCTGCAGTTCGCCA
TGACCTCGGTACTGTTCGCCATCTGGGCGATCGCTTCGAGCCTGAACGACATTCTCATCACCCAGTTCAAAGCCGTGTTC
TCCTTGAGCGACCTCGCCACCGCCTTCGTGCAAAGCGCGTTCTACGGCGGCTACTTCCTCATCGCCATTCCGGCGTCGCT
GTTCATCAAGAAGTTCAGCTACAAACTTGGCATCATCGCGGGCCTGAGCTTCTTCGCGATAGGTTGCTTCATCTTCTTCC
CCGCCTCACGCCTGGTCACTTACGAAGTGTTCCTATTCGCCATCTTCGTGGAGGCAATCGGCCTGAGCTTCCTCGAAACC
TCCGCCGACACGTATGCCACGCTGATGGGCCCGAAACGACTCGGCACCGTGCGTCTGAACATCGCACAGACCATGAACGC
ACTTGGCCTGATCACCGGCATCCTGCTCGGCAAATACCTCGTGTTCCAAGACTCCAACCTGCATGCGGCGATGGCGAAGA
TGGCTCCGGACGAGGCCAAGGCGTATGGCGCCGAACAACTCGCCCGCACACTGGAGCCCTACAAGTATCTGCTGATCGTG
CTGGCTGTGCTGATCGTGCTGTTCGCCCTCACCAAGTTCCCGAAGTGCCGTCCGGCCGCCAACCCTCACGCCCCAGCCAC
CGAGAACAAGGTCAAGCTGAGCGAAACCCTGCGTTATCTGTTCCACAACCATCGCTTCCTTAAGGGCATCGGCGTGCAGT
TCATCTACATCGGCGCACAGACCGGCATCTGGTCCTTCACCATCCGCCTTGCGCTCAATCAGGGCGGCAGCTCGATGACC
GACCGCAAGGCCGCCGATTTCATGATCTTCAGCTACGTGGTCTTCTTCGTAGGCCGTCTGCTTGCCAGCTATCTGCTCTC
CCGCTCCCGTGAGACCCGCGTACTCGCTACGTTCATGGCGCTTGGCTGCGTGTCACTGCTATGCGTCGCGTTCCTGCCGG
GCATGGGCGCCGTGTGGGCCGCCGTGGCCGTAAGCCTGTTCCTGGGACCGGGATGGCCGACCATCTACGCCCGCACCCTG
TCCACCGTCGAGGACCGCCGCCACACCGAAACCGCCGGCGCGATCATCGTGATGGCACTGGTCGGCGGCGCCGTGCTGCC
GACCCTGCAAGGCGCCCTGTCCGATGCGGTCACCATGCAGTTCTCCTTCATCCTGCCGGCCATCGAGTTGCTGATCGTCG
CCCTCTACTTCGTCTCCGAATTCAAGCGCGACAAGTACACGCCACAACAACTCGCCGTCATGGCCGCCACTGCGCAGCAA
GGGGCCAAGTAA

Protein sequence :
MTRPIDAQTIDATSPTSPNASAEPASDGAQPKKQRWIEFPDGYLNRTPVLQFAMTSVLFAIWAIASSLNDILITQFKAVF
SLSDLATAFVQSAFYGGYFLIAIPASLFIKKFSYKLGIIAGLSFFAIGCFIFFPASRLVTYEVFLFAIFVEAIGLSFLET
SADTYATLMGPKRLGTVRLNIAQTMNALGLITGILLGKYLVFQDSNLHAAMAKMAPDEAKAYGAEQLARTLEPYKYLLIV
LAVLIVLFALTKFPKCRPAANPHAPATENKVKLSETLRYLFHNHRFLKGIGVQFIYIGAQTGIWSFTIRLALNQGGSSMT
DRKAADFMIFSYVVFFVGRLLASYLLSRSRETRVLATFMALGCVSLLCVAFLPGMGAVWAAVAVSLFLGPGWPTIYARTL
STVEDRRHTETAGAIIVMALVGGAVLPTLQGALSDAVTMQFSFILPAIELLIVALYFVSEFKRDKYTPQQLAVMAATAQQ
GAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85172.1 hypothetical protein Not tested PAI V 536 Protein 4e-92 51
deoP ADD91723.1 permease DeoP Not tested PAI-I AL862 Protein 2e-92 51