|
Name : oppD2 (BDP_1529) Accession : YP_003360949.1 Strain : Bifidobacterium dentium Bd1 Genome accession: NC_013714 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : 3.6.3.20 Position : 1708163 - 1709875 bp Length : 1713 bp Strand : - Note : - DNA sequence : ATGAGCGAAATCGACAACGGCAATCTCGCCGAAATCAAGGATCTGAGCGTCTCCTTCATGACCGACGCCGGCTCCATCAA GGCCATCGACGGGATCAGTTTCAAGATTCCCCGCAGGAAGGTCATCGGCGTGGTGGGCGAATCCGGTTCCGGCAAGTCCG TGACCGCGCGCTCCATCATCAAACTGCTGCCGGAAACGGCAACGACCTCTGGTGCGATCTACCTGTCGAACCGTGCCGGC AACGAGGAACTCGACGTGCTGTCCCTATCCGGCGAGCAGCTACGCGAAATGCGCGGCTCCGAGGCGGCGATGGTGTTCCA GGAGCCGAATTCGGTGCTGAACCCGGTGTATACCATCGGCTGGCAGATCGAGGAGGGGCTGCGGGCCCACGGCATGAAAG ACAAGAAAGAGCTGCGTGCCAAGGCGATCGACATTCTGAAGAAGGTCGGCATTCCCAACGCCGAAACCCGGGTCGATTAC TATCCGCACCAGTTCTCCGGCGGCCAGAAGCAGCGCATCGTCATCGCCATGGCGTTGGTGCTCAATCCCGGTCTGATTCT GGCCGATGAGCCGACCACCGCCCTTGACGTGACCGTACAGGCCGAAATCCTCGATCTGCTACGTCTCGCACGCGACGAAT TCGATGCCTCCGTGCTCATCATCACGCACAACATGGGCGTCATCGCCGACATCGCCGACGAGGTCGTGGTCATGTACCGT GGCCACGTGGTCGAGCAAGGCGGCGTGGAACAGATCTTCTATTCACCGCAGGACGACTACACCAAGCGTTTGCTGGGTGC CGTACCGCGCATCGGGCAAAAGCTCATCGTGCGTGACGGCAATGGCAAGGTCATCGAGCGTGAAAAGGATTGGCGTGAAC AGCCGGTCGCGGTCGAGGCCAAGGGGCTGACCATCACGTATCCGGGCCATCTCATGCAGCCCGATTTCAAGGCCGTGGAT GGCATCGACTTCACCATCCACCGTTCCGAGGTGCTGGGACTGGTAGGCGAATCCGGTTCCGGCAAATCCACCACGGGCCG TGCCATCGCAGGCCTGCAGAAGGTTTCCGGCGGTTCGCTCAACGTGCTCGGCATCGAAATGAACGGCGTGAAGGAACGTG ACTTCAAGCCCAAGCGCGCCGACATCGGCTTCGTGTTCCAGGATCCCGGCAGCTCGTTCAACCCGCTGATGACCATCGCG GAGAACGTGGCCGAACCGCTGATCGTGCACGGGAAATACTCCTCCGTGGCTGACGCACGGCATTATGTGGGCGATCTGCT GGAAATGGTCCAGCTGCCACGCGCATACATGAACCGCTTCCCCCATGAGCTGTCCGGCGGCCAGCGTCAGCGCGCCTCCC TGGCGCGTGCGCTCGCGTTGAAGCCGAGCCTGCTCATCGCCGACGAGCCGACCTCCGCATTGGATGTGTCGGTGCAGGCG AAGGTGTTGGAACTGTTCAAGAAACTACAGGTCGAAATTGGTTTCGCCTGCCTGTTCATCACTCACGATCTTGCGGTAGT AGATATGCTTGCCGATCGCATCATGGTGATGCACAAGGGCAAGATCGTCGAACATGGCGATGCCGACCAGATCATGCAAC ATCCGCAAAATCCGTACACGCAGAAGCTGCTGGCCTCGTTGCCGGTGCCGGATCCGCGTGAACAACGCGGGCATCGTGAG CATCTGCACGAGTTGCTCGCGGCCCAACAGTAG Protein sequence : MSEIDNGNLAEIKDLSVSFMTDAGSIKAIDGISFKIPRRKVIGVVGESGSGKSVTARSIIKLLPETATTSGAIYLSNRAG NEELDVLSLSGEQLREMRGSEAAMVFQEPNSVLNPVYTIGWQIEEGLRAHGMKDKKELRAKAIDILKKVGIPNAETRVDY YPHQFSGGQKQRIVIAMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADEVVVMYR GHVVEQGGVEQIFYSPQDDYTKRLLGAVPRIGQKLIVRDGNGKVIEREKDWREQPVAVEAKGLTITYPGHLMQPDFKAVD GIDFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLNVLGIEMNGVKERDFKPKRADIGFVFQDPGSSFNPLMTIA ENVAEPLIVHGKYSSVADARHYVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARALALKPSLLIADEPTSALDVSVQA KVLELFKKLQVEIGFACLFITHDLAVVDMLADRIMVMHKGKIVEHGDADQIMQHPQNPYTQKLLASLPVPDPREQRGHRE HLHELLAAQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-59 | 41 |
