Gene Information

Name : tkt (BDP_1145)
Accession : YP_003360599.1
Strain : Bifidobacterium dentium Bd1
Genome accession: NC_013714
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 1291379 - 1293487 bp
Length : 2109 bp
Strand : -
Note : -

DNA sequence :
ATGACCGAATTCAAGGAGACCGAGCTGGACGAGCGCGCCATCAAGATGGCCAAGGTCCTGTCGGCCGACGCGGTTGAGCG
TGCGGGACACGGCCACCCGGGTTCCCCCGTCTCCCTGGCGCCCATCGCCTACACCCTGTACCAGCACTTCATCAAGCACG
ATCCGAATGATCCCAAGTGGGAAGGTCGCGACCGCTTCATCCTTTCCGGCGGCCATGCCTCCCTCACCCAATACGTTCAG
CTGTACTTCTCCGGCTACGGCCTGACCCTGGACGACCTGAAGAACTTCCGCGGCGGCGCCGATACCCGCACCCCGGGTCA
CCCGGAATACGGCCTGACCCCCGGCATCGAAATGACCACCGGTCCGCTGGGCCAGGGCTTCGCCTCCGCCATCGGCTTTG
CCTACGGTCAGCGCTTCGAGCGCGGTCTGCTTGATCCGCAGGCTCCGGAAGGTGAATCCCCGTTCGATCACAACATCTGG
GTCATCTGCGGTGAAGGCGATATCGAAGAGGGCATCTCCGGCGAAGCCGCATCCCTCGCCGCCAACCAGCAGCTGGGCAA
CCTGACCGTGATCTTCGATGCCAACCGCATCCAGATCGAAGGCGACACCAACCTGGTGCTGGCCGAAGACGTGCTCAAGC
GCTTCCAGGCCTACGGCTGGTACACCGATGAGTTCAGCTTCATCCAGCCCGACGGTTCCTACAAGGAGGACGTCGACGGT
CTGGCCGAGACCATCGCCAAGGCCCAGGCCGCCGCCCCGAACCAGCCGAAGCTCATCAAGGTCGACACTCTGATCGCATG
GCCGACCCCGGGCAAGACCAACGATCCGTCCTCCCACGGCTCCAAGCTGGGCGCCGAGGCCGTCGCCGGTCTCAAGAAGC
TGCTCGGCTATGATCCGGAAGAATCCTTCCACGTCGACGAAGAAGCCCTGGCTCACGCTCGCAAGGTCGCCGAGCGCGGT
CTCGAGGCCCATAAGGAATGGGACGAAAAGTACGACGCATGGCGCAAGGCCAACCCGGACAAGGCCGCCCTGTACGACCG
CATCAAGGCCGGCGAGCTTCCGGAAGGCTTCGATAAGGCCATCGACGACCTCGAGGCTACCTTCGAAGTTGGCAAGGGTG
TCGCGACCCGTGGAGCTTCCGGCTCCGCGCTGAACGCCATCGCCGCCGTCATGCCGGAACTCTGGGGCGGCTCCGCCGAC
CTCGGTGGCTCCAACAAGACCGACCTCAAGGGTGCCGCCACCTTCGCTCCGGAGGAGTGCGCCACCAAGCAGTGGCCGAA
CTGCAACAAGTACGGTCGTCAGCTGCACTTCGGCGTGCGCGAGTTCACCATGGGCACCATCACCAACGGTATCCTGCTGG
GCTCCCACACCCGTCCGTTCGGCGGCACCTTCTTCATGTTCTCCGACTATGAGCGCCCGGCCGTGCGTCTGGCCGCCCTT
ATGGAGATCCCGAACCTGTACGTGTGGTCCCACGACTCCGTCGCCGTCGGCGAGGATGGCCCGACCCACCAGCCGATCGA
GCATCTGGCATCCTTCCGTGCCATCCCGCAGCTCGAGGTCGTTCGTCCGGCCGATGCCTATGAGACCGCCGAAGCCTACC
GTGCATTCTTCGAGAAGAAGAACACCCTCCCGGCCGCCATGGTCCTGACCCGCCAGGGTGTCCCGGTCCTCGCCGAGACC
GCAGCAAAGGCCAAGGAAGGTGTGAAGAAGGGCGCTTACGTGCTCATCGACACCGAAGGCACTCCGGATGTCATCATCAT
GGCCACCGGTTCCGAGGTTCAGTGGGCCGTTGCCGCCGCCAAGACTCTGGCCGGTGAAGGCGTCAAGGCCCGCGTCGTGT
CCGTGCCGTCCCTCGAGTGGTTCGAAGAACAGGACGCCGAGTACAAGGAAGCCGTGCTGCCGGCCTCCGTCAAGGCCCGT
GTCTCCGTCGAAGCCGGCGTTGCCATGCCGTGGTACAAGTACCTTGGCTCCTTCGGCAAGCCCGTTTCCATCGAACAGTT
CGGCCTGCAGGGCGATGGCGCTCAGAACATGATCGATCTGGGCATCACCGCCGAGCATGTGGTGGAAGCCGCCAAGGCCT
CCATCGCCGAAGTCGAAGCCGCCAAGTGA

Protein sequence :
MTEFKETELDERAIKMAKVLSADAVERAGHGHPGSPVSLAPIAYTLYQHFIKHDPNDPKWEGRDRFILSGGHASLTQYVQ
LYFSGYGLTLDDLKNFRGGADTRTPGHPEYGLTPGIEMTTGPLGQGFASAIGFAYGQRFERGLLDPQAPEGESPFDHNIW
VICGEGDIEEGISGEAASLAANQQLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDVDG
LAETIAKAQAAAPNQPKLIKVDTLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPEESFHVDEEALAHARKVAERG
LEAHKEWDEKYDAWRKANPDKAALYDRIKAGELPEGFDKAIDDLEATFEVGKGVATRGASGSALNAIAAVMPELWGGSAD
LGGSNKTDLKGAATFAPEECATKQWPNCNKYGRQLHFGVREFTMGTITNGILLGSHTRPFGGTFFMFSDYERPAVRLAAL
MEIPNLYVWSHDSVAVGEDGPTHQPIEHLASFRAIPQLEVVRPADAYETAEAYRAFFEKKNTLPAAMVLTRQGVPVLAET
AAKAKEGVKKGAYVLIDTEGTPDVIIMATGSEVQWAVAAAKTLAGEGVKARVVSVPSLEWFEEQDAEYKEAVLPASVKAR
VSVEAGVAMPWYKYLGSFGKPVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEVEAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-94 41
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 6e-96 41