Gene Information

Name : glnA-1 (MCP_2464)
Accession : YP_003357519.1
Strain : Methanocella paludicola SANAE
Genome accession: NC_013665
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2419839 - 2421281 bp
Length : 1443 bp
Strand : +
Note : -

DNA sequence :
ATGGCATCCGACAACATGAAGAAACTCAAGGAAATCATAACGAAAAACAAGATCAAGTACGTTGATTACAAGTTCATCGA
TGTCCCCGGCACCTGGCAGCACAAGACCCATCCCATCAGCGAGCTGGACGAGGACATATTCAAGTATGGCACCGGCTTCG
ACGGCTCGAGCATCCGCGGCTTCCAGGGCATCGAGGAAAGCGACATGCTCCTCATACCCGACGCGGACACGGCGTTCCTG
GACCCCTTCATCCGGGAGCCGACGCTTTCGCTTACCTGCGACGTTTGCGACCCCGACGGCATCAAGCCGTACCACCGGGA
CCCGAGGTATATCGCGAAGAAGGCCGAGAAGTACATGGCCACCACCGGCATCGCCGACGCGGCGTACTTCGGCCCCGAGC
TGGAATTCTTTATCTTCGACGACGTCCAGTTCGACGTCCTCACACCTTATAAGGGCATGAGCTACTCGATCAACTCCGAC
GAGGGCATCTGGAACTCCAACCACAACTCCACCCCCAACCTGGGCCACCGGCCGAGGTTCAAGGAGGGCTACTTCCCGGT
CGCCCCGACCGACACCCAGACCGACATCCGGAACGAGATGGTCAGCACCATGATGGACATCGGCATGAAGGTCGAGCTGC
ACCACCACGAGGTGGCCACGGCCGGCCAGGCCGAGATCGGCATCCGGTTCAATACCCTCACGAAGATCGCGGACCAGACC
CTGATGTACAAGTACGTCGTCAAGAACATCGCCCAGAAGAATGGCAAGACGGCCACCTTCATGCCGAAGCCCCTGTTCGG
CGACAACGGGAGCGGCATGCACACCCACCAGAGCCTGTGGAAGGGCGGCAAGCCCCTGTTCTTCGACAAGGACGGCTATG
GCATGCTCTCGAAGACCGCGTTGTACTACATCGGCGGCCTGCTGACGCACGCCCACTCGCTGCTCGGCTTCTGCAGCCCC
AGCACCAACTCGTACAAGAGGCTCGTGCCCGGCTACGAGGCGCCCGTGAACCTGGTCTTCTCGAGCAGGAACAGGAGCGC
CGCGGTACGCATTCCCATGTACTCGGACAACCCGAAGACCAAGCGCATCGAGTTCCGACCTCCCGACGCCACCTGCAACC
CGTACCTGGCCTTCGCCGCCATGCTCATGGCCGGCCTCGACGGCATCCAGAAGAAGATCGACCCGACCAAGGCAGGGTTC
GGCCCCATCAACAAGAACATTTATCACCTGCCCGAGGCCGAGAAGGCGAAGATCAAGTCGGTTCCCGGCTCGCTGGACGA
GGCGCTCACCGCGCTGGAGAACGACCACGAGTACCTCACGAAGGGCGGCGTGTTCACCGAGGACTTAATCGGCGCCTGGG
TGGACTACAAGCGTAATACGGAGATCGACCCTGTGAAGATCAGGACTCACCCGTACGAGCTGTACCTTTACTACGATGCA
TGA

Protein sequence :
MASDNMKKLKEIITKNKIKYVDYKFIDVPGTWQHKTHPISELDEDIFKYGTGFDGSSIRGFQGIEESDMLLIPDADTAFL
DPFIREPTLSLTCDVCDPDGIKPYHRDPRYIAKKAEKYMATTGIADAAYFGPELEFFIFDDVQFDVLTPYKGMSYSINSD
EGIWNSNHNSTPNLGHRPRFKEGYFPVAPTDTQTDIRNEMVSTMMDIGMKVELHHHEVATAGQAEIGIRFNTLTKIADQT
LMYKYVVKNIAQKNGKTATFMPKPLFGDNGSGMHTHQSLWKGGKPLFFDKDGYGMLSKTALYYIGGLLTHAHSLLGFCSP
STNSYKRLVPGYEAPVNLVFSSRNRSAAVRIPMYSDNPKTKRIEFRPPDATCNPYLAFAAMLMAGLDGIQKKIDPTKAGF
GPINKNIYHLPEAEKAKIKSVPGSLDEALTALENDHEYLTKGGVFTEDLIGAWVDYKRNTEIDPVKIRTHPYELYLYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-93 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA-1 YP_003357519.1 glutamine synthetase VFG1399 Protein 3e-126 57