Gene Information

Name : pdxS (MCP_1448)
Accession : YP_003356503.1
Strain : Methanocella paludicola SANAE
Genome accession: NC_013665
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1453163 - 1454059 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGCTCGAAGAGTTACGCCACGGCACCACGCTATTGAAGCGAGGGTTCGCAAAGATGCAGAAGGGCGGCGTCATCAT
GGACGTCACCAACAAGGACCAGGCCCTCATCGCCGAGAACGCCGGAGCCGTCGCCGTCATGGCGCTCCAGGCCGTCCCGG
CGGACATCCGGAAGGCCGGCGGCGTAGCACGGATGGCCGACCCCGCCATCGTCGAGGAGATCATCAACGCGGTCACCATA
CCCGTTATGGCCAAAGCCCGCATCGGCCACTTCGTCGAGGCGGAGATCCTCGAGGCCATCGGCGTGGACATGATCGACGA
GTCCGAGGTGCTTACCCCGGCTGACAGTAAATATCATATCGAGAAGACGAAATTTACCGTCCCCTTCGTATGCGGCGCAC
GGGACCTGGGCGAGGCGCTCCGCCGGATCGACGAGGGCGCGGCCATGATCAGGACCAAGGGCGAAGCCGGCACCGGCGAC
GTGTCCGAGGCCGTTAACCACATGAAGAAGATCCAGGGCCAGATCCGTGAGCTCCGGGGCCTTACGCATGAAGAGCTCGT
TAAATATGCAAGGACGATCGAGGCGCCCTCCGAGCTGGTCATCGAGACGGCCCGGCTGCAGCGCATCCCCGTCGTGAACT
TCGCCGCAGGCGGCGTGGCGACTCCCGCAGACGCCGCGTTAATGATGCGCCTCGGAGCGGACGGCGTATTCGTCGGCTCG
GGCATCTTCAAGTCCGAAAGCCCGGACAAGATGGCGAGGGCTATCGTCGAAGCGGTCAACAATTATGACAACCCGGCGAA
GCTGGCCGAAATATCCAAGGGCACGGGCAACCCGATGAAGGGCATTGGCATCAGCACCATGCCCACCGAAGAGAAGATAC
AGGCCCGCGGCTGGTAA

Protein sequence : 
MKLEELRHGTTLLKRGFAKMQKGGVIMDVTNKDQALIAENAGAVAVMALQAVPADIRKAGGVARMADPAIVEEIINAVTI
PVMAKARIGHFVEAEILEAIGVDMIDESEVLTPADSKYHIEKTKFTVPFVCGARDLGEALRRIDEGAAMIRTKGEAGTGD
VSEAVNHMKKIQGQIRELRGLTHEELVKYARTIEAPSELVIETARLQRIPVVNFAAGGVATPADAALMMRLGADGVFVGS
GIFKSESPDKMARAIVEAVNNYDNPAKLAEISKGTGNPMKGIGISTMPTEEKIQARGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-79 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-79 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-79 63