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Name : copB (MCP_1308) Accession : YP_003356363.1 Strain : Methanocella paludicola SANAE Genome accession: NC_013665 Putative virulence/resistance : Resistance Product : copper-transporting P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 1300809 - 1302839 bp Length : 2031 bp Strand : - Note : - DNA sequence : ATGGACATGGAGCACGGCATGAAGGAAAGAGACATGGCAGGGCATAAAATGGAGCATAAAGGGCATGCTCCCGGGCCCGC CCATGCGGGCCACATGCAGATGATCGAGGACTATAAAAAGAGGTTCTTCGTCTGCCTCGTCCTGACCGTCCCCATCATCC TGTTATCTTCCACGGTACAGGGCTTCTTCGGCGTCAGCTTTACTTTCCCGGGCGCCGATTTTCTCGTCTTCCTGCTCTCG ACTATCGTTTACTTTTATGGTGGCTACCCGTTCCTTAAGGGCATCGTCGATGAGCTAAAAGAGCGCAGGCCCGGCATGAT GACCCTGATCGCCGTCGCCATAAGTGTAGCTTACTTCTACAGCGCCGCGGTCGTGTTCGGCCTTCCCGGCATGGTCTTCT TCTGGGAGCTGGCGACGCTGATCGACATCATGCTGCTCGGCCACTGGCTGGAGATGCGGTCGGTCATGGGCGCATCGAGG GCCCTGGAAGAGCTCGTGAAGATCATGCCCTCGGAAGCCCACATGGTGCACGACGGCCACGTCATGGACGTGAAGGTCGA GGAGCTGAAGCCGGGGGATAAAGTGCTGGTCAAGCCCGGGGAGAAGGTGCCCGTCGACGGCATCGTCATCGACGGCGAGA CGAGCGTCAACCAGGCGATGCTGACCGGCGAATCTCGGCCGGTGGCGAAGAGGCCGGGCGATAAGGTGATCGGGGGCTCC ATCAACGGCGAAGGCTCCGTGACCGTCCGGGTCGAAAAGACGGGCAGGGACACGTACCTGAGCCAGGTCGTCGAGCTCGT GCGACAGGCCCAGGAGAGCAAGTCCCGCACCCAGGATCTGGCCGACAGGGCGGCGCTTGTGCTGGTCATCATCGCGCTGG CCGCGGGCGGCATCACGCTCATCGCGTGGCTTCTCTTCGGCCAGACACTGGCCTTCGCCATCGAGCGTATGGCGACGGTC ATGGTAATTACCTGCCCCCACGCCCTAGGCCTGGCCGTGCCGCTGGTCGTGGCAGTTTCGACAGCGCTGGCGGCAAAGTC CGGCCTGCTCATTCGGGACAGGAGCGCGTTCGAGAACGCCCGGAGCCTGCAGGCCGTGGTGTTCGATAAGACCGGCACGC TTACAGAGGGTAGGTTCGGCGTCACAGACATCGTCCCACTAGGCCCCATGGATGAAAACGGCATACTCGGCATGGCGGCA TCGCTCGAGTCCGGCTCGGAGCACCTGATAGCGGCCGGCATTGTGAAAAGCGCGAAGGAAATAGGTATTATACTTAAGCC AGCTGCTGGGTTTCGGGCAATCCCCGGAAAAGGCGTAGAAGGAACGATCGATGGTAAGACATACATGGTGGTCAGCCCCG GATACCTTAAGGAAAAGAACATAGAAGCGAGCAATGAGAAAATGGGCGACATCAGGGAACAAGGGAAAACGGTCGTGTAC CTGCTCGAAGACGAAAAGCCCATGGGTGCCATAGCCCTGGCCGACGTGATACGGAAAGAATCCCGGGAAGCCGTAGCCAG GCTAAAGCAGATGGGCATCAAGTGCATGATGCTCACGGGCGATAATAGGTCCGTGGCGAAACACGTAGCCGATGAGCTCG GGCTGGACGAATATTTCGCCGAAGTGCTCCCGCACGAAAAGGTGAATAAGATAAAGGAGGTCCAGGAAAAGTACCGCGTC GCGATGGTGGGCGATGGCATCAACGATGCCCCGGCCCTGGTACAGGCCGATGTGGGCATCGCCATCGGCGCAGGCACCGA CGTCGCCATCGAAAGCGCCGACATCGTACTGGTCGGTAACGACCCCCGGGAAGTCGTGGACATTATCGTTCTTTCGAGGA GAACGTATACCAAGATGGTCGAGAACCTGCTCTGGGCGACGGGTTATAACGCCTTTGCCATCCCGCTGGCGGCGGGAGCC CTGTACGCATATGGCATCCTCCTGTCACCGGCGGTCGGCGCACTGCTCATGAGCGCCAGCACGGTCATCGTCGCCATTAA CGCGCGGCTTCTGAGGATGCCGGAAGCATGA Protein sequence : MDMEHGMKERDMAGHKMEHKGHAPGPAHAGHMQMIEDYKKRFFVCLVLTVPIILLSSTVQGFFGVSFTFPGADFLVFLLS TIVYFYGGYPFLKGIVDELKERRPGMMTLIAVAISVAYFYSAAVVFGLPGMVFFWELATLIDIMLLGHWLEMRSVMGASR ALEELVKIMPSEAHMVHDGHVMDVKVEELKPGDKVLVKPGEKVPVDGIVIDGETSVNQAMLTGESRPVAKRPGDKVIGGS INGEGSVTVRVEKTGRDTYLSQVVELVRQAQESKSRTQDLADRAALVLVIIALAAGGITLIAWLLFGQTLAFAIERMATV MVITCPHALGLAVPLVVAVSTALAAKSGLLIRDRSAFENARSLQAVVFDKTGTLTEGRFGVTDIVPLGPMDENGILGMAA SLESGSEHLIAAGIVKSAKEIGIILKPAAGFRAIPGKGVEGTIDGKTYMVVSPGYLKEKNIEASNEKMGDIREQGKTVVY LLEDEKPMGAIALADVIRKESREAVARLKQMGIKCMMLTGDNRSVAKHVADELGLDEYFAEVLPHEKVNKIKEVQEKYRV AMVGDGINDAPALVQADVGIAIGAGTDVAIESADIVLVGNDPREVVDIIVLSRRTYTKMVENLLWATGYNAFAIPLAAGA LYAYGILLSPAVGALLMSASTVIVAINARLLRMPEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 4e-83 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_003356363.1 | copper-transporting P-type ATPase | BAC0629 | Protein | 0.0 | 71 |
| copB | YP_003356363.1 | copper-transporting P-type ATPase | BAC0079 | Protein | 3e-115 | 43 |
| copB | YP_003356363.1 | copper-transporting P-type ATPase | BAC0383 | Protein | 1e-93 | 41 |
| copB | YP_003356363.1 | copper-transporting P-type ATPase | BAC0101 | Protein | 8e-80 | 41 |
