|
Name : ECSF_0071 (ECSF_0071) Accession : YP_003348061.1 Strain : Escherichia coli SE15 Genome accession: NC_013654 Putative virulence/resistance : Virulence Product : putative ribokinase Function : - COG functional category : - COG ID : - EC number : - Position : 76114 - 77346 bp Length : 1233 bp Strand : + Note : - DNA sequence : ATGTATCGGGATACCCGTCGTGAATATATTGTCCGGTTACTTCGCAACAAGGATGAGTGCAGTGTTAGCGATTTAGCTAA CTATTTTTCTGTTACCAAAGAGACGATTCGGACAGATTTAGCGTGGTTGCAAAAGCGTGGTGTAGTGAGTCGTCATCATG GAGGCGTCTCATTGAAAAAACATTTAATGCAAAATGCGCTTTCGCAACAAGAGTATGTCGATATGAGTTTGCTTATCAAG CAACAACAGCAGGGTATTGGCTATTTAACCTCGCTTGATGATAAAGGACGCCGAATGGTAGGTAAAGTTTGTGTGTTAGG ATCATTTAACGTCGATATTGTGGCGAAAGTGTATCGCTTCCCGAATGAAGGCGAAACGTTAGTGGCCAGGGAAACTACCA TGGGGCCGGGGGGTAAAGGCGCGAATCAGGCACTAGCCGCTCATCGGGCAGGTGCGCAAATACACTTCGCCTGTAAGATT GGTCGCGATCAGTTTAATCATTTTGCCCGCAATCATATTGAGTCCATTGGTATTGGTTCATTTACTTTTTATGAGTCTGA ACTATCTACCACCGGTTGTGCGGTCATTTATGTAAATGATGAAGGTGAAAACATGATTGCTATGTCTCCAGGGGCAAATC ATGAATTAAGTGATAACGATATTATTCAACTTTCTCACTTTATAGCCGAGTCCGATGTATTCATTGTACAGATGGAAAAT AATCTTGCCGCTACTCAACTGGCATTAAAATGTGCTCAAAAAATGCAGGTGACAACGATTTTAAATCCTGCACCGTGGTC CAGTGATGTCGCCACATTATTACCTTTTGTTGATATTGTGACGCCAAATGAAACCGAAGCATCGGCGATGTCAGGTATGG TAATTGACAATATTTCTGATGCTGTGAAGGCTGCGAAGCATATTTATAATGCCGGGCAATGTTCAGTAATTATTACGATG GGAAAACGAGGTGCATTAATTTATGACGGGCAACAATGTGCGCATATTCCGGCATTTTCGGCAGTCGCTGTAGATACAAC AGGTGCGGGTGATGCGTTTAATGGCGCGCTCGCCGCCGCACTGGCGAAGGGAGAATCACTTGTTAAAGCAGCCTGGTATG CCAGCGCTTTCGCTTCGCTGGCAGTAGAAAAAGAAGGGGCAGCCAATATGCCTGATATCTCTCTGGTGGATGCCAGAATT CAGCAGCAGAATGTTGCCATTCAGACTTTCTGA Protein sequence : MYRDTRREYIVRLLRNKDECSVSDLANYFSVTKETIRTDLAWLQKRGVVSRHHGGVSLKKHLMQNALSQQEYVDMSLLIK QQQQGIGYLTSLDDKGRRMVGKVCVLGSFNVDIVAKVYRFPNEGETLVARETTMGPGGKGANQALAAHRAGAQIHFACKI GRDQFNHFARNHIESIGIGSFTFYESELSTTGCAVIYVNDEGENMIAMSPGANHELSDNDIIQLSHFIAESDVFIVQMEN NLAATQLALKCAQKMQVTTILNPAPWSSDVATLLPFVDIVTPNETEASAMSGMVIDNISDAVKAAKHIYNAGQCSVIITM GKRGALIYDGQQCAHIPAFSAVAVDTTGAGDAFNGALAAALAKGESLVKAAWYASAFASLAVEKEGAANMPDISLVDARI QQQNVAIQTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 2e-51 | 42 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 1e-51 | 42 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 1e-51 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECSF_0071 | YP_003348061.1 | putative ribokinase | VFG0483 | Protein | 6e-52 | 42 |
