Gene Information

Name : ECSF_4211 (ECSF_4211)
Accession : YP_003352201.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4592415 - 4592783 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence :
GTGTCAGACAAACTCTCCGGGATAACTCATCCCGATGACAATCACGACCGCCCCTGGTGGGGGCTTCCCTGCACAGTGAG
GCCCTGTTTTGGCGCTCGTCTGGTGCAAGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCGCT
TCAGCGACGCAGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAATTAATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCGAAAGGACTGACCTGCGAAGCCGACACCCTCGGCAGTTG
TGGTTACGTTTATCTGGCTTTTTATCCAACATCCGAAACGAAAAAGTAA

Protein sequence :
MSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKGLTCEADTLGSCGYVYLAFYPTSETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-53 99
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-50 95
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-50 95
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-50 94
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 9e-51 93
unnamed AAL08477.1 unknown Not tested SRL Protein 5e-50 93
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-50 93
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-48 92
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 4e-50 92
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-50 92
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-50 92
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 1e-48 91
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 9e-50 91
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 9e-50 91
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-49 90
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 5e-48 89
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 1e-46 88
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 6e-47 88
unnamed AAL57576.1 unknown Not tested LEE Protein 1e-47 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_4211 YP_003352201.1 hypothetical protein VFG1619 Protein 4e-51 93
ECSF_4211 YP_003352201.1 hypothetical protein VFG1068 Protein 2e-50 93
ECSF_4211 YP_003352201.1 hypothetical protein VFG1681 Protein 8e-49 92
ECSF_4211 YP_003352201.1 hypothetical protein VFG0662 Protein 2e-50 91