Gene Information

Name : ECSF_4207 (ECSF_4207)
Accession : YP_003352197.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4589852 - 4590670 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATACGAACCAGATACGCCGTGACCGTCCGCTGACACACGAAGAACTGATGCACTA
TGTACCCGGTATTTTTGGGGAAGACCGGCATACCTCCCGCAGTGAACGCTATACGTATATCCCCACCATCACCGTGCTGG
AAAGTCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACA
AAACACATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGGAGAACATGTCCCTGAAATCATTCTGCTCAACTCCCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGTCAGAACGGATGCGTCTGTGGTCAGTCTCCGG
GGGAAGTGCGTGTTCCGCATCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGACACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCAGTCACCACCGCTGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AAGACCTGTGGAGCGCATATCAGACCATCCAGGAGAATATGCTGAAAGGCGGAATTTCCGGCCGCAGTGCAAAAGGAAAA
CGTATCCACACCCGTGCCATTCACAACATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTAATGGCAGAAACGCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYTNQIRRDRPLTHEELMHYVPGIFGEDRHTSRSERYTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSPGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPTRQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHNIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-122 98
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-122 98
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-122 98
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 5e-122 97
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 7e-121 96
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 7e-121 96
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 7e-119 94
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-117 93
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-117 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-116 92
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 8e-115 91
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 8e-115 91
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-113 91
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-118 90
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 3e-112 90
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-76 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 1e-75 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_4207 YP_003352197.1 hypothetical protein VFG0658 Protein 3e-121 96
ECSF_4207 YP_003352197.1 hypothetical protein VFG1676 Protein 4e-119 94
ECSF_4207 YP_003352197.1 hypothetical protein VFG1526 Protein 1e-113 91
ECSF_4207 YP_003352197.1 hypothetical protein VFG1615 Protein 1e-112 90