Gene Information

Name : ECSF_4189 (ECSF_4189)
Accession : YP_003352179.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4572501 - 4573919 bp
Length : 1419 bp
Strand : -
Note : -

DNA sequence :
TTGTCACAGAATAAGCCCGGTAAAATACGGGCTTATGAACGACATCTTTCTGACGACATCTTCCTGCTGAAACAGCGCCT
GGCCGAACAGGAAGCGCTGATCCACGCCCTGCAGGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGC
AGCTGGATAAACTCCGCCGGATGAACTTCGGCAGTCGCTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGAT
CTGAACCGGCTTCAGAAAGAGAGCGATACGCTGACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGAC
CCGCACCCGTAAGCCGTTCCCTGAATCACTACCCCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACT
GCGGCGGTTCACTGAGCTATCTGGGCGAGGATACCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGG
ACGGTACGGGAAAAACATGCCTGTACTCAGTGCGATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGG
TATCGCCGGACCGGGGCTGCTGGCCCGCGTGCTGACCTCGAAGTATGCAGAGCACACCCCGCTGTATTGCCAGTCAGAAA
TATACGGCCGGCAAGGTGTGGAGCTGAGCCGTTCACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCG
CTGGAAGAGGTGCTTCATGGCTATGTCATGACTGACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCC
GGGTAATAAGAAGACGAAGACCGGGCGGTTGTGGGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTG
CAGTGTGGTTCGCTTACAGCCCGGACAGAAAAGGCATCCATCCGCAGACTCATCTTGCTTGCTTCAGCGGTGTGCTGCAA
GCGGATGCGTACGCCGGGTTCAACGAGCTGTATCGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCG
AAAGATCCACGATGTGCACGTCCGCATCCCGTCAGCACTGACGGAAGAAGCCCTAGAGCAGATCGGTCAGTTGTACGCCA
TAGAGGCGGATATAAGGGGAATGCCGGCAGAGCAGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCC
CTGGAAAGCTGGTTGCGTGAAAAGATGAAGACCCTGTTCTTCGGCTCTGGCCATGGTGGTGAGCGGGGAGCGCTACTGTA
CAGCCTGATCGGGACGTGCAAACTGAATGACGTGGATCCAGAAAGCTACCTTCGCCATGTGCTTGGCGTCATAGCAGACT
GGCCGGTCAACCGGGTCAGCGAACTGCTTCCGTGGCGCATAGCACTGCCAGCTGAATAA

Protein sequence :
MSQNKPGKIRAYERHLSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEAD
LNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIR
TVREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSGWVDACCRLLSP
LEEVLHGYVMTDGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQ
ADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKS
LESWLREKMKTLFFGSGHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08460.1 unknown Not tested SRL Protein 0.0 99
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 2e-159 99
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 99
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 99
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 99
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 99
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-163 99
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 97
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 97
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 97
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 97
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 97
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 96
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 96
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-122 75
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-108 63
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 6e-101 59
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-101 59
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 6e-99 54
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 5e-99 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-102 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_4189 YP_003352179.1 hypothetical protein VFG1051 Protein 0.0 99
ECSF_4189 YP_003352179.1 hypothetical protein VFG1516 Protein 9e-160 99
ECSF_4189 YP_003352179.1 hypothetical protein VFG0793 Protein 0.0 99
ECSF_4189 YP_003352179.1 hypothetical protein VFG1700 Protein 1e-122 75
ECSF_4189 YP_003352179.1 hypothetical protein VFG1736 Protein 2e-111 64