Gene Information

Name : ECSF_4173 (ECSF_4173)
Accession : YP_003352163.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4555074 - 4555469 bp
Length : 396 bp
Strand : +
Note : -

DNA sequence : 
GTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTA
TGACAGGATACGGAGGACGGTTGTGGAGCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGA
TGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTT
ATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTT
ACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA

Protein sequence : 
MIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVEHVFGERTLATLERLLSLMSAFEVVVWMTDGWPLYESRLKGKLHV
ISKRYTQRIERHNLNLRQHLARLGRKLLSFSKSVELHDKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 2e-56 97
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 3e-56 97
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-56 97
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-56 97
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-56 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 2e-56 95
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-54 94
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-55 91
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-55 91
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-55 91
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 7e-53 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_4173 YP_003352163.1 transposase VFG0612 Protein 6e-55 94