Gene Information

Name : ECSF_3945 (ECSF_3945)
Accession : YP_003351935.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : formate-dependent nitrite reductase nrfC subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4302961 - 4303632 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGACCTGGTCTCGTCGCCAGTTTCTCACCGGCGTCGGTGTGCTGGCCGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGC
GAAAACGTTGAATATCAATGGGGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGG
ATGCTTGTCGGAAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACGATTATTCGTAGCGAGCCGCAGGGCGAATTT
CCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCATGCGCCGTGCGTTGACGTCTGCCCGACCGG
TGCGTCTTTTCGCGACGCTGCCAGTGGGATTGTCGATGTTAATCCGGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCG
CCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACGGCGGACAAATGCGATTTCTGCCGTAAGACCCATTTG
CAGGCCGGTAAGCTGCCCGCGTGCGTTGAAGCTTGCCCGACGAAGGCGCTGACGTTTGGCAATCTGGACGATCCCAACAG
TGAGATTTCGCAACTGCTGCGCCAGAAGCCCACTTACCGCTACAAGCTGGCGCTGGGCACCAAACCGAAGCTGTACCGCG
TACCGTTTAAATACGGGGAGGTGAGCCAATGA

Protein sequence : 
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACRKVNKVPEGVSRLTIIRSEPQGEF
PDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTHL
QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-31 41
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-31 41
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 1e-31 41
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-31 41
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_3945 YP_003351935.1 formate-dependent nitrite reductase nrfC subunit VFG0486 Protein 7e-32 41