Gene Information

Name : ECSF_3940 (ECSF_3940)
Accession : YP_003351930.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Resistance
Product : putative transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4296397 - 4298046 bp
Length : 1650 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGAGTTCTGACGGCGCTTGCCGCCACACTCCCTTTCGCAGCTAACGCCGCGGATGCTATTAGCGGGGCCGTAGA
GCGCCAGCCAACGAACTGGCAGGCGATTATTATGTTCCTGATTTTCGTCGTGTTTACGCTCGGCATTACCTACTGGGCGT
CAAAACGCGTACGTTCGCGTAATGACTACTACACCGCAGGCGGCAATATCACCGGTTTTCAGAACGGGCTGGCGATTGCC
GGGGACTATATGTCCGCCGCCTCATTCTTGGGGATCTCCGCGCTGGTGTTTACCTCCGGCTATGACGGCTTAATTTACTC
GCTGGGCTTCCTGGTGGGCTGGCCGATCATTCTGTTCCTGATTGCCGAACGTCTGCGTAACCTCGGTCGCTACACCTTTG
CCGATGTGGCCTCTTACCGTCTGAAACAAGGGCCGATTCGTATTCTTTCGGCCTGTGGTTCTCTGGTGGTGGTGGCGCTT
TACCTTATCGCCCAGATGGTGGGCGCAGGTAAACTGATCGAGCTGCTGTTTGGCCTTAACTATCACATTGCGGTAGTGCT
GGTCGGCGTGCTGATGATGATGTACGTCCTGTTCGGCGGCATGCTGGCGACCACCTGGGTACAAATTATTAAAGCCGTGC
TGTTGCTGTTCGGTGCCAGCTTTATGGCCTTTATGGTGATGAAACACGTCGGCTTTAGCTTCAACAATCTGTTCAGCGAA
GCGATGGCGGTACACCCGAAAGGTGTCGACATCATGAAGCCGGGCGGGCTGGTGAAAGATCCTATCTCCGCGCTCTCTTT
GGGGCTAGGACTGATGTTTGGTACGGCGGGCTTGCCGCATATTCTGATGCGCTTCTTTACGGTCAGCGATGCCCGCGAAG
CACGTAAGAGCGTGTTCTACGCCACCGGATTTATGGGCTACTTCTACATCCTGACCTTTATTATCGGCTTTGGCGCGATC
ATGCTGGTCGGTGCGAATCCGGAATATAAAGACGCGGCGGGCCATCTGATTGGTGGTAACAACATGGCAGCAGTTCACCT
GGCCAATGCGGTGGGCGGCAACCTGTTCCTCGGCTTTATTTCAGCGGTTGCTTTCGCCACCATTCTTGCAGTGGTTGCGG
GTCTGACGCTGGCGGGCGCATCGGCGGTGTCTCACGACCTGTACGCTAACGTCTTCAAAAAAGGTGCGACCGAACGTGAA
GAGCTGCGGGTATCGAAAATCACCGTACTGATCCTCGGTGTGATTGCCATTATCCTCGGCGTGCTGTTTGAGAATCAGAA
CATCGCCTTTATGGTGGGGCTGGCGTTTGCCATCGCGGCGAGCTGTAACTTCCCGATCATTCTGCTTTCCATGTACTGGT
CGAAACTGACTACCCGTGGCGCAATGCTGGGCGGCTGGTTAGGACTGATTACTGCGGTGGTGCTGATGATCCTCGGCCCG
ACGATTTGGGTACAGATCCTCGGTCACGAAAAAGCCATTTTCCCGTATGAATACCCGGCGCTGTTCTCTATCAGCGTGGC
ATTCCTCGGTATCTGGTTCTTCTCGGCAACGGATAATTCAGCGGAAGGTGCGCGCGAGCGTGAACTGTTCCGTGCGCAGT
TTATCCGCTCCCAGACTGGCTTTGGCGTTGAGCAGGGCCGCGCGCATTAA

Protein sequence :
MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKRVRSRNDYYTAGGNITGFQNGLAIA
GDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSE
AMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAI
MLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVFKKGATERE
ELRVSKITVLILGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMLGGWLGLITAVVLMILGP
TIWVQILGHEKAIFPYEYPALFSISVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 1e-122 58
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-66 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_3940 YP_003351930.1 putative transport protein BAC0564 Protein 0.0 99
ECSF_3940 YP_003351930.1 putative transport protein BAC0570 Protein 9e-135 65