Gene Information

Name : ECSF_2797 (ECSF_2797)
Accession : YP_003350787.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3057381 - 3061943 bp
Length : 4563 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTAAGCGCAACCCTGTTAGCCGGTTGTGATGGCGG
TGGTTCGGGGTCATCCTCCGATACGCCACATGCAGATTCTGGTTCAGGGTCTTTGCCGGATGTGAAACCTGATCCAACAC
CAAACCCGGAGCCGACGCCTGAGCCGACTCCGGACCCAGAACCTACGCCGGATCCAACACCTGATCCTGAGCCGACACCA
GAACCGGAGCCAGAACCTGTTCCCACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCAGCGGGTAACTGGTGCTACCTG
TAATGGTGAATCCAGCGATGGCTTTACTTTTACACCTGGCAAGGACGTTACTTGCGTGGCGGGTAACACGACAATTGCCA
CCTTCAACACTCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTATCGTTTAGTCTTGAGGACGCGCAAGAA
CTGGCGGCTTCCGACAACAAGAAAAGCAATGCGGTTTCGTTGGTAACGTCCAGTAACAGCTGTCCGGCGGATACAGAACA
GGTTTGCCTGACGTTCTCTTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATTGATCTGGCACCGGAGG
AGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCCACTCATACCTCATCGGTC
GTGCCAGTCACCACGCCGGGAACAAAACCGGATCTGAACGCTTCCTTCGTGTCAGCTAACGCGGAACAGTTTTATCAGTA
TCAACCTACTGAAATTATTCTCTCAGAAGGTCGCCTGGTAGATAGCATGGGCAATGGTGTGGTTGGCGTAAATTACTACA
CCAGCTCAGGCCGTGGTGTAACTGGCGAAAACGGCAAATTCAACTTCAGCTGGGGCGAAACCATCTCCTTTGGTATCGAC
ACCTTTGAACTGGGTTCAGTACGCGGCAATAAGTCGACCATTGCATTGACTGAATTGGGCGACGAAGTTCGCGGCGCGAA
TATCGATCAACTTATTCATCGTTATTCCCAGGCCGGAAAAAATGATGAGCGTGAAGTGCCGGACGTCGTGCGCCAGGTCT
TTGCCGAGTACCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAATGGCGAGGCGTTGAGCGAAGGCGATCAA
AACTTTCCGCGGACAAACGAATTTCTTGAGCAGCTTAAATCCGGGCAGGCTAAAGAGATTGATACGGCGATTTGTAATTC
TCTCGGGGGCTGCAACTCTCAACGTTGGTTCTCGTTGACTGCACGCAATGTTAACGAAGGTCAGATTCAGGGCGTTATCA
ACAAGCTGTGGGGTGTGGATGAAGATTACAAATCGGTGACGAAATTCCACGTCTTCCATGACTCTACCAACTTCTATGGC
AGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCTGCCTTCCCGATTCTGATGGCGCGTAATGATAA
AAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAATGAGCTGGCGTACATTACGGAAGCGCCTTCTCTGG
TTGAGCCGGAAAACGTTACGCGCGATACCGCCACCTTCAACCTGCCATTTATTTCGCTGGGGCAAGTTGGTGAGGGCAAG
CTGATGGTTATCGGTAACCCGCACTACAACAGCATTTTGCGTTGCCCTAATGGTTACAGTTGGAACGGGAGCGTTAATAA
AGACGGGCAGTGTACGCTCAACAGCGACCCGGACGACATGAAGAACTTCATGGAGAACGTGTTGCGCTATCTGTCAAATG
AACGCTGGCTGCCGGATGCGAAGAGCAGTATGACCGTGGGCACTAACCTGGATACGGTTTATTTCAAAAAAGCGGGTCAG
GTATTAGGAAATAGTGCACCGTTTGCTTTCCACAAGGACTTCGCTGGCATCACGGTCAAACCGATGACCAGCTATGGCAA
TCTGAATCCAGATGAAGTTCCTCTGTTGATCCTCAATGGCTTTGAATACGTCACACAATGGGGTAGCGATCCTTACTCTA
TTCCTCTGCGAGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGATCTGATCGCCTATCTGAACAAAGGT
GGCTCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCCAGTTTTGTGCGTCTGCTGGATGC
CGCGGGTCTGTCAATGGCTCTGAACAAATCGGTGGTGAATAACGATCCTCAAGGGTATCCGGATCGCGTTCGTCAGCGTC
GCGCGACTGGCATTTGGGTTTATGAACGTTATCCTGCTGCAGACGGCGCGCAACCGCCGTACACCATCGACCCAAATACA
GGGGAAGTGACCTGGAAATACCAGCAAGACAACAAGCCTGATGACAAGCCGAAACTGGAAGTTGCGAGCTGGCAGGAGGA
AGTTGAGGGCAAACAGGTAACGCGTTATGCCTTTATTGATGAAGCGGAATACACAACAGAAGAATCTCTGGAAGCGGCAA
AGGCAAAAATCTTTGAGAAGTTTCCTGGGTTACAGGAGTGTAAGGACTCGACTTACCATTACGAGATTAACTGTTTGGAG
CGCCGCCCAGGCACGGATGTTCCGGTAACAGGTGGCATGTATGTTCCGCGCTATACGCAACTGAATCTTGACGCCGACAC
CGCGAAAGCGATGGTGCAGGCGGCGGATTTAGGCACCAACATTCAGCGCCTGTATCAGCATGAGCTTTATTTCCGTACCA
AAGGCAGTAAAGGTGAGCGTCTGAACAGTGTTGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAACGAT
ACGAAATATCGTTACGAAGAGGGCAAGGAAGATGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGCTACGCCAA
TGATGCCTATGCAGGCGGCACCAAGTGCTCCGCAGATCTGAAAAAATCGCTGGTCGATAACAACATGATCTACGGTGACG
GTAGCAGCAAAGCGGGCATGATGAACCCAAGCTATCCGCTCAACTATATGGAAAAACCGCTGACGCGTCTGATGCTGGGC
CGTTCCTGGTGGGATCTGAACATTAAGGTTGATGTGGAGAAGTACCCAGGATCCGTATCGGCAAAGGGTGAGAGCGTTAC
GGAAAACATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCGGGTAACATGCAGTCAACCGGCCTGTGGGCACCGGCCC
AGCAGGACGTCACCATTAAGTCTTCGGCGTCAGTCCCAGTGACTGTTACCGTGGCGCTGGCTGACGACCTGACCGGACGT
GAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTATACTCTGGAGGCTAACGGTGAAGTGACCTT
CAAGGTGCCTTATGGTGGTCTGATTTATATCAAGGGCGACAGTAAGGATGATGTTTCTGCTAACTTCACCTTTACCGGTG
TAGTAAAAGCGCCGTTCTATAAAGACGGCGAATGGAAAAACGATCTGGACTCACCGGCGCCGCTGGGCGAGCTGGAGTCT
GCGTCGTTCGTCTATACCACGCCGAAGAAGAACCTTGAGGCCAGCAATTTCACTGGTGGTGTAGCAGAATTCGCTAAAGA
TCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGCAATGAAACGAGCGGTAACCACCGGATGTTTACCTATG
AAGCATTGACGGGGCATAAACACCGTTTCGCCAACGATGTGCAGATCTCCATCGGTGATGCGCACTCGGGTTATCCGGTA
ATGAACAGCAGCTTCTCGACGAACAGCTCCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATTTGGCACGAAGTCGG
TCATAACGCTGCAGAAACACCGCTGAACGTACCGGGTGCAACTGAAGTGGCGAACAACGTGCTGGCGCTGTACATGCAGG
ATCGCTATCTTGGCAAGATGAACCGTGTCGCTGACGACATTACCGTCGCGCCGGAATATCTGGACGAGAGCAACGGTCAG
GCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAAGAGTGGGCAGAGAAAAACTTTGATAT
CAAGAAATGGTATCCAGAAGGCTCTCTGCCAGCGTTCTACAGCGAGCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGT
TGATGCATCGCAAAGCACGCGGCGATGATGTTGGTAACAGCACCTTTGGCGGCAAGAATTACTGTGCTGAATCCAACGGT
AACGCTGCCGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCC
GGGTGCAAGTGCTTACCAGTTGCCGGGGGCAACGGAGATGAGTTTCCAGGGCGGTGTGAGCTCTTCGGCTTACAGCACGC
TCGCGTCGCTTAATCTGCCGAAACCGGAAAAAGGGCCGGAAACCATTAACAAGGTTACCGAGCATAAGATGTCTGCCGAG
TAA

Protein sequence :
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPHADSGSGSLPDVKPDPTPNPEPTPEPTPDPEPTPDPTPDPEPTP
EPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPGKDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQE
LAASDNKKSNAVSLVTSSNSCPADTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSSV
VPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSMGNGVVGVNYYTSSGRGVTGENGKFNFSWGETISFGID
TFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSQAGKNDEREVPDVVRQVFAEYPNVINEIINLSLSNGEALSEGDQ
NFPRTNEFLEQLKSGQAKEIDTAICNSLGGCNSQRWFSLTARNVNEGQIQGVINKLWGVDEDYKSVTKFHVFHDSTNFYG
STGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQVGEGK
LMVIGNPHYNSILRCPNGYSWNGSVNKDGQCTLNSDPDDMKNFMENVLRYLSNERWLPDAKSSMTVGTNLDTVYFKKAGQ
VLGNSAPFAFHKDFAGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTDLIAYLNKG
GSVLIMENVMSNLKEESASSFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRATGIWVYERYPAADGAQPPYTIDPNT
GEVTWKYQQDNKPDDKPKLEVASWQEEVEGKQVTRYAFIDEAEYTTEESLEAAKAKIFEKFPGLQECKDSTYHYEINCLE
RRPGTDVPVTGGMYVPRYTQLNLDADTAKAMVQAADLGTNIQRLYQHELYFRTKGSKGERLNSVDLERLYQNMSVWLWND
TKYRYEEGKEDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLMLG
RSWWDLNIKVDVEKYPGSVSAKGESVTENISLYSNPTKWFAGNMQSTGLWAPAQQDVTIKSSASVPVTVTVALADDLTGR
EKHEVALNRPPRVTKTYTLEANGEVTFKVPYGGLIYIKGDSKDDVSANFTFTGVVKAPFYKDGEWKNDLDSPAPLGELES
ASFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNETSGNHRMFTYEALTGHKHRFANDVQISIGDAHSGYPV
MNSSFSTNSSTLPTTPLNDWLIWHEVGHNAAETPLNVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLDESNGQ
AWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPEGSLPAFYSEREGMKGWNLFQLMHRKARGDDVGNSTFGGKNYCAESNG
NAADTLMLCASWVAQTDLSEFFKKWNPGASAYQLPGATEMSFQGGVSSSAYSTLASLNLPKPEKGPETINKVTEHKMSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85238.1 hypothetical protein Not tested PAI V 536 Protein 0.0 90
VC0395_A0370 YP_001216326.1 lipoprotein Not tested VPI-1 Protein 0.0 49
VC0845 NP_230493.1 hypothetical protein Not tested VPI-1 Protein 0.0 48
acfD AAK20802.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75646.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75664.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75670.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75658.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75661.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75667.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 48
acfD ACK75649.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 47
acfD ACK75655.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 47
acfD ACK75652.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2797 YP_003350787.1 hypothetical protein VFG0106 Protein 0.0 48