Gene Information

Name : ECSF_2791 (ECSF_2791)
Accession : YP_003350781.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3050183 - 3051406 bp
Length : 1224 bp
Strand : -
Note : -

DNA sequence :
ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGCATGATTGAGGCGGATTCCGCGCGTCA
TGCCCGTCAATTGTTACGCGGTAAAGACCTCATTCCCGTGCACATTGAAGCCCGGATGAATGCATTGGCAGGGGGAATGT
TGCAGCGTCGGCGGCACGCACATCGTCGCGTGGCGGCGGCAGATCTGGCGCTGTTCACGCGCCAACTGGCAACGCTGGTG
CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGCGAAAAACTGCATGTAAAAAGCCTCGGAAT
GGCGCTGCGCAGCCGGATTCAGGAAGGTTATACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGACTCCCTGT
TTTGTTCGATGGTCGCTGCCGGAGAAAAATCCGGGCATCTCGACGTGGTGCTCAATCGCCTGGCGGATTACACCGAACAG
CGACAGCGCCTGAAATCACGTCTATTGCAGGCCATGCTCTACCCGCTGGTACTGCTGGTGGTGGCAACGGGCGTGGTCAC
TATTTTGCTGACGGCAGTAGTGCCGAAAATTATCGAACAGTTTGATCATCTCGGACACGCGCTGCCCGCCTCCACCCGAA
TGCTCATCGCCATGAGCGACACGTTACAGGCCAGCGGCGTGTACTGGCTGGCGGGTTTGCTGGGGCTTCTGGTGCTGGGG
CAACGGCTACTCAAAAATCCTGCCATGCGCCTGCGCTGGGATAAAACCTTGCTGCGTTTGCCCGTGACGGGGCGTGTTGC
GCGCGGACTGAATACGGCGCGTTTTTCCCGCACGTTAAGCATCCTCACCGCCAGCAGTGTTCCGCTGCTGGAAGGCATTC
AGACCGCCGCCGCCGTGTCGGCAAATCGTTATGTCGAGCAACAACTGCTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC
AGCCTGCGCGCCGCGCTGGCGGATCTGCGCCTGTTCCCGCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG
CGAGCTGGAAACCATGCTTGAACAGGCCGCGGTCAACCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTAGGGC
TGTTTGAGCCGGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATCGTCATCGCCATCCTCGAGCCGATGCTGCAA
CTGAACAATATGGTTGGAATGTAA

Protein sequence :
MALFYYQALERNGRKTKGMIEADSARHARQLLRGKDLIPVHIEARMNALAGGMLQRRRHAHRRVAAADLALFTRQLATLV
QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
RQRLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRMLIAMSDTLQASGVYWLAGLLGLLVLG
QRLLKNPAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS
SLRAALADLRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ
LNNMVGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 3e-154 99
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-154 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2791 YP_003350781.1 putative type II secretion protein VFG2049 Protein 4e-147 97
ECSF_2791 YP_003350781.1 putative type II secretion protein VFG0181 Protein 6e-68 47