Gene Information

Name : ECSF_2790 (ECSF_2790)
Accession : YP_003350780.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3049711 - 3050166 bp
Length : 456 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTCGTTATCCCGCACACAAAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTGGTGCCTAACCTGCTGGGCAACAAAGAGAAAGCCGATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAAAACGCGCTGGATATGTACCGACTGGATAACGGGCGTTATCCGACCACCGAGCAGGGACTGGAGGCGCTG
ATCCAGCAACCGGCCAATATGGCGGACTCCCGCAACTACCGTACTGGTGGATACATCAAACGACTGCCAAAGGATCCGTG
GGGCAATGATTATCAGTATCTCAGCCCAGGTGAAAAAGGGCTGTTTGATGTTTATACCCTGGGAGCAGATGGTCAGGAAA
ACGGGGAGGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence : 
MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADSRNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-66 100
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-66 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2790 YP_003350780.1 putative type II secretion protein VFG2050 Protein 3e-66 99
ECSF_2790 YP_003350780.1 putative type II secretion protein VFG0180 Protein 2e-37 55
ECSF_2790 YP_003350780.1 putative type II secretion protein VFG1871 Protein 1e-33 53