Gene Information

Name : ECSF_2788 (ECSF_2788)
Accession : YP_003350778.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3048776 - 3049147 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGCGTGGATTTACCTTGCTGGAAGTAATACTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATCCTTGAGGAGAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACTGCGC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACGATCCCTCTGAATACCGGTAACGTGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGACGACTTTTCGCC
AGTGATTCAGTCAAGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence : 
MKRGFTLLEVILALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTIPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-40 98
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-38 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2788 YP_003350778.1 putative type II secretion protein VFG2052 Protein 2e-38 92