Gene Information

Name : ECSF_2784 (ECSF_2784)
Accession : YP_003350774.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3045487 - 3046023 bp
Length : 537 bp
Strand : -
Note : -

DNA sequence :
ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGACACA
ACATCTGGCGGGGCGTTCTCCGCGTGAAAAAGGCATGTTACTGGCCGCGGCGGTGTTCCTGTTTAGCGCCGGATATTACG
TTCTCATCTGGCAACCGCTGAGTGAACGGATAGAACAACAGGAGACGATGTTGCAGCAGCTGGTGGCGATGAACGCGCGA
CTGAAGAGCACTGCGCCGAATATTATTGCGGCGCGAAAATCCGGCACGACAACGCCAGCACAGGTATCGCGGGTCATCAG
CGACAGCGCTTCCGCGCACTCGGTGGTCATCAAACGGATTGCCGAGCGTGGGGAGAATATTCAAGTCTGGATAGAACCAG
TGGTGTTTAATGACCTGCTGAACTGGTTAAAGGCACTGGATGAAAAATATGCGCTGCGGGTGATACAAATTGATGTCAGC
GCAGGTGAGAAGCCAGGGATGGTGAATGTGCAGCGACTGGAGTTTGGACGGGGGTAG

Protein sequence :
MLRDKFIHYFQQWRERQLSRGEHWLTQHLAGRSPREKGMLLAAAVFLFSAGYYVLIWQPLSERIEQQETMLQQLVAMNAR
LKSTAPNIIAARKSGTTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIEPVVFNDLLNWLKALDEKYALRVIQIDVS
AGEKPGMVNVQRLEFGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspM CAE85225.1 GspM, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-78 96
gspM YP_854398.1 general secretion pathway protein YghD Not tested PAI I APEC-O1 Protein 9e-77 93
yghD CAI43907.1 putative secretion pathway protein Not tested LEE Protein 4e-77 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2784 YP_003350774.1 putative type II secretion protein VFG2056 Protein 2e-56 91