Gene Information

Name : ECSF_2782 (ECSF_2782)
Accession : YP_003350772.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : capsule transport protein KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3042867 - 3043541 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAGATTGAGAATTTGACGAAGTCATATCGCACGCCAACGGGTCGACATTATGTGTTTAAGGATTTAAACCTCGA
AATCCCTTCAGGAAAAAGTGTTGCCTTTATTGGTCGTAACGGAGCGGGTAAATCAACGTTACTGAGAATGATTGGCGGCA
TTGACCGCCCCGACAGTGGAAAGATCATCACCAATAAAACGATATCATGGCCAGTCGGCCTTGCAGGTGGATTTCAGGGA
AGTTTAACCGGACGCGAAAACGTAAAATTTGTTGCGCGGTTATACGCGAAGCAAGAAGAGCTGAAAGAGAAAATTGAGTT
TGTCGAAGAATTTGCCGAACTCGGTAAGTACTTCGATATGCCGATCAAAACTTACTCATCTGGTATGCGATCGCGTTTAG
GCTTCGGTTTAAGCATGGCATTTAAGTTTGATTATTATATCGTCGATGAAGTAACCGCAGTCGGTGATGCCAGGTTTAAA
GAAAAATGCGCTCAATTGTTTAAAGAAAGGCATAAAGAGTCTAGTTTTTTGATGGTTTCACATAGTTTGAATTCATTGAA
AGAGTTTTGTGATGTGGCCATTGTGTTTAAAGATGATAATGCGGTTAGTTTTCATGAGGATATTCAGGAGGGGATAGAGG
AGTATAAAAACAACATAACAATTAATACATGTTGA

Protein sequence : 
MIKIENLTKSYRTPTGRHYVFKDLNLEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGFQG
SLTGRENVKFVARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYIVDEVTAVGDARFK
EKCAQLFKERHKESSFLMVSHSLNSLKEFCDVAIVFKDDNAVSFHEDIQEGIEEYKNNITINTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-74 74
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-69 71
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 8e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2782 YP_003350772.1 capsule transport protein KpsT VFG1449 Protein 4e-70 71
ECSF_2782 YP_003350772.1 capsule transport protein KpsT VFG0696 Protein 7e-44 45
ECSF_2782 YP_003350772.1 capsule transport protein KpsT VFG0258 Protein 3e-42 43
ECSF_2782 YP_003350772.1 capsule transport protein KpsT VFG2563 Protein 8e-39 41