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Name : ECSF_2775 (ECSF_2775) Accession : YP_003350765.1 Strain : Escherichia coli SE15 Genome accession: NC_013654 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein KpsC Function : - COG functional category : - COG ID : - EC number : - Position : 3031501 - 3033528 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCGTGCCAGAAACTTTC TCTGCTGCGCCCTGTTCCGCAAGAAGTTGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTGGCATTTACTACGATGCCAGCAAGCCTTCAGCACTGGAGAAACTGGTACA GGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCACCTGCGTTTGTGGCTGATGAGTCAGAACGTTCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAT ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCACCCAGATGTACTGGAAGGAAAGAAAACAGGCTATTTCGCCGATCTGCGCGCCACGCAAC GAGTACGTTTGATTGCCGAGAATGTCAGCCCGCAGTCGCTGTTGCGACACGTTTCCCGGGTTTACGTCGTGACATCCCAA TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCAGTAACATGTTTCGGCCAGCCCTGGTATGCAAGCTGGGGCTTAACCGA CGATCGCCATCCGCAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGATCCGCAAACGGGAGAAGTAAGCGATCTATTTACCGTGCTGCAATGGCTGCAATTACAG CGCAACCATCAGCAGCAGCGTAATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCAGCGATCCTGAAACCTTT CTTGCAAACGGCAACAAACCGGCTGAGTTTTTCACGTCGCTGTACTGCGGCGAGCGCCTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCGAGCCGAAGCGCAGCGAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTGCGTTCATCC GGACTTGGCTCTGACCTGCTGCCGCCGCTATCGCTGGTGCTGGATAAACGCGGTATTTACTATGACGCCACGCGCCCCAG CGATCTGGAAGTGCTGCTGAATCATAGCCAGCTAACGCTGGCGCAGAAGATGCGAGCTGAAAAATTACGCCAGCGACTGG TTGAAAGCAAACTGAGTAAGTACAACCTGGGAGCCGATTTCTCTCTACCAGCCGAAGCCAAAGATAAAAAAGTTATCCTG GTGCCGGGTCAGGTAGAAGACGATGCCTCAATTAAAACCGGCACCGTTTCTATTAAGAGCAACCTTGAGTTATTACGCAC AGTACGCGAGCGTAATCCGCACGCTTACATTATTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCGATA TTCCGGCAGAACTGACTGCTGAACTAGCTGATTATCAGGCACTGGACGCCGATATTATTCAATGCATTCAGCGCGCAGAT GAAGTGCATACCATGACGTCGCTGTCGGGGTTTGAAGCGTTATTACATGGCAAGCACGTACATTGTTACGGCCTGCCCTT CTATGCCGGTTGGGGTTTAACCGTCGATGAACATCGCTGCCCGCGTCGCGAGCGAAAATTAACGTTAGCGGATTTGATCT ATCAGGCGCTGATTGTTTATCCAACCTATATCCACCCAACACGGCTACAACCTATTACGGTTGAAGAGGCGGCGGAATAT TTGATCCAGACACCGCGCAAGCCGATGTTTATTACCCGAAAAAAAGCGGGGCGAGTAATACGTTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQ RNHQQQRNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEY LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 99 |
| kpsC | CAE85214.1 | KpsC protein | Virulence | PAI V 536 | Protein | 6e-176 | 94 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 2e-127 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECSF_2775 | YP_003350765.1 | capsule polysaccharide export protein KpsC | VFG0259 | Protein | 7e-128 | 50 |
| ECSF_2775 | YP_003350765.1 | capsule polysaccharide export protein KpsC | VFG0692 | Protein | 2e-117 | 47 |
| ECSF_2775 | YP_003350765.1 | capsule polysaccharide export protein KpsC | VFG0704 | Protein | 5e-105 | 47 |
