Gene Information

Name : ECSF_2773 (ECSF_2773)
Accession : YP_003350763.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : polysialic acid transport protein KpsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3029078 - 3030754 bp
Length : 1677 bp
Strand : +
Note : -

DNA sequence :
ATGAAATTATTTAAATCAATTTTACTGATTGCCGCCTGTCACGCGGCGCAGGCCAGCGCGGCCATTGATATTAACGCTGA
CCCAAACCTGACAGGAGCCGCGCCGCTTACCGGTATTCTGAACGGACAGAAGTCGGATACGCAAAACATGAGCGGCTTCG
ACAATACCCCGCCGCCCGCACCGCCGGTGGTAATGAGCCGTATGTTTGGTGCTCAACTTTTCAACGGCACCAGCGCGGAT
AGCGGTGCGACGGTAGGATTCAACCCTGACTATATTCTGAATCCGGGCGATAGCATTCAGGTTCGCTTGTGGGGTGCGTT
CACCTTTGATGGTGCGTTACAGGTTGACCCCAAAGGTAATATTTTCCTGCCGAACGTTGGTCCAGTGAAAGTTGCTGGCG
TCAGTAATAGTCAGCTAAATGCCCTGGTCACATCCAAAGTGAAGGAAGTATACCAGTCCAACGTCAACGTCTACGCCTCC
TTATTACAGGCGCAGCCAGTAAAAGTGTACGTGACCGGATTTGTGCGTAATCCTGGTCTGTATGGCGGTGTGACGTCTGA
TTCGTTACTCAATTATCTGATCAAGGCTGGCGGCGTTGATCCAGAGCGCGGAAGTTACGTTGATATTGTGGTCAAGCGCG
GTAACCGCGTGCGCTCCAACGTCAACCTGTACGACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGT
GACACCATCATCGTCGGGCCGCGTCAGCATACTTTCAGCGTTCAGGGCGATGTCTTTAACAGCTACGACTTTGAGTTCCG
CGAAAGCAGCATTCCCGTAACGGAAGCGTTGAGCTGGGCGCGCCCTAAGCCTGGCGCGACTCACATTACGATTATGCGTA
AACAGGGGCTGCAAAAACGCAGCGAATACTATCCGATCAGTTCTGCGCCAGGCCGTATGTTGCAAAATGGCGATACCTTA
ATCGTCAGCACTGACCGCTATGCCGGCACCATTCAGGTTCGGGTTGAAGGCGCGCACTCTGGCGAACATGCCATGGTACT
GCCTTATGGTTCCACTATGCGTGCGGTTCTGGAAAAAGTCCGCCCGAACAGCATGTCGCAGATGAACGCGGTTCAGCTAT
ATCGCCCATCAGTAGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCCGCC
CAGTCCTCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAAGCGCAACTGATCAGCCGCTTTGTGGCGAAAGCGCGCAC
CGTGGTTCCGAAAGGTGAAGTGATCCTCAACGAATCCAATATTGATTCTGTTCTGCTTGAAGATGGCGACGTCATCAATA
TTCCGGAGAAAACATCGCTGGTTATGGTTCATGGCGAGGTGCTGTTCCCGAACGCGGTGAGCTGGCAGAAGGGAATGACC
ACCGAGGATTACATCGAGAAATGTGGTGGCCTGACGCAGAAATCGGGTAACGCCAGAATTATCGTCATTCGTCAGAACGG
TGCAGCCGTCAACGCAGAAGATGTGGATTCACTCAAACCGGGCGATGAGATTATGGTTCTGCCGAAATATGAATCGAAAA
ATATTGAAGTTACCCGTGGTATTTCCACCATCCTCTATCAGCTGGCGGTGGGTGCAAAAGTGATTCTGTCTTTGTAA

Protein sequence :
MKLFKSILLIAACHAAQASAAIDINADPNLTGAAPLTGILNGQKSDTQNMSGFDNTPPPAPPVVMSRMFGAQLFNGTSAD
SGATVGFNPDYILNPGDSIQVRLWGAFTFDGALQVDPKGNIFLPNVGPVKVAGVSNSQLNALVTSKVKEVYQSNVNVYAS
LLQAQPVKVYVTGFVRNPGLYGGVTSDSLLNYLIKAGGVDPERGSYVDIVVKRGNRVRSNVNLYDFLLNGKLGLSQFADG
DTIIVGPRQHTFSVQGDVFNSYDFEFRESSIPVTEALSWARPKPGATHITIMRKQGLQKRSEYYPISSAPGRMLQNGDTL
IVSTDRYAGTIQVRVEGAHSGEHAMVLPYGSTMRAVLEKVRPNSMSQMNAVQLYRPSVAQRQKEMLNLSLQKLEEASLSA
QSSTKEEASLRMQEAQLISRFVAKARTVVPKGEVILNESNIDSVLLEDGDVINIPEKTSLVMVHGEVLFPNAVSWQKGMT
TEDYIEKCGGLTQKSGNARIIVIRQNGAAVNAEDVDSLKPGDEIMVLPKYESKNIEVTRGISTILYQLAVGAKVILSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsD YP_854331.1 polysialic acid transport protein KpsD precursor Not tested PAI I APEC-O1 Protein 0.0 99
kpsD AAZ04468.1 polysialic acid transport protein precursor Virulence PAI I APEC-O1 Protein 0.0 99
kpsD CAE85212.1 KpsD protein Virulence PAI V 536 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2773 YP_003350763.1 polysialic acid transport protein KpsD VFG1448 Protein 0.0 99