Gene Information

Name : ECSF_2233 (ECSF_2233)
Accession : YP_003350223.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2417109 - 2417336 bp
Length : 228 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCTTATTGCCTCGGGAAAACGCACCCCAAAAAAGATATAGACTTCTGAGAATATCAGAAGTGATTAATTTGACTGG
CTTACCCAAGTCAACAATTTATCTAAAGATAAAGAATGATGAATTTCCGAACCAAGTTTCTATCGGTTCTCGTTCTGTTG
CATGGGTGGAGCATGAAGTTAATGAATGGATAGAGAAGAATATTCTCAATAGAAAATTAAACTCCTAA

Protein sequence : 
MSLLPRENAPQKRYRLLRISEVINLTGLPKSTIYLKIKNDEFPNQVSIGSRSVAWVEHEVNEWIEKNILNRKLNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-10 49
unnamed CAA21398.1 - Not tested HPI Protein 2e-10 49
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-13 48
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-13 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-10 48
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-12 47
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-07 45
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 5e-11 41
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 7e-11 41
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 7e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2233 YP_003350223.1 putative transcriptional regulator VFG1141 Protein 2e-13 48
ECSF_2233 YP_003350223.1 putative transcriptional regulator VFG1118 Protein 2e-11 41