Gene Information

Name : ECSF_2009 (ECSF_2009)
Accession : YP_003349999.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2166619 - 2167350 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence :
ATGGCGCTTTACACAATTGGTGAAGTGGCGTTGCTTTGTGATATTAACCCTGTCACGTTACGCGCGTGGCAGAGGCGTTA
CGGATTGCTGAAACCGCAACGGACAGACGGCGGCCATCGGCTGTTCAACGATGCCGATATTGACCGGATCCGCGAGATCA
AACGCTGGATCGACAACGGCGTGCAGGTCAGCAAAGTAAAAATGCTGCTCAGTAATGAAAATGTTGATGTGCAGAACGGC
TGGCGCGATCAGCAAGAAACATTACTGACTTACCTGCAAAGCGGCAATCTGCATAGCCTGCGAACGTGGATCAAAGAGCG
CGGTCAGGATTACCCCGCCCAGACACTCACCACACATCTGTTTATTCCTCTGCGCCGACGGCTTCAGTGCCAACAACCGA
CTCTCCAGACGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCTCTATTTGCCTGGCTTCGGCGCGCAAAAAA
CAGGGTAAAGATGCACTGGTGGTTGGCTGGAATATTCAGGATACCACTCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCA
ACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTGTTCGAAGGCCGTACATTGCTGG
TGTGGTGCGGTGATAATCGAACCTCCGCCCAACAGCAGCAACTCACCAGTTGGCAAGAACAAGGCCATGATATTTTCCCA
CTCGGCATTTAA

Protein sequence :
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNG
WRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQTLLAILDGVLINYISICLASARKK
QGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGDNRTSAQQQQLTSWQEQGHDIFP
LGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 9e-43 45
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 1e-42 45
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 2e-42 45
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 9e-43 45
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 3e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_2009 YP_003349999.1 putative transcriptional regulator VFG0491 Protein 7e-43 45