Gene Information

Name : ECSF_1889 (ECSF_1889)
Accession : YP_003349879.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2024636 - 2025109 bp
Length : 474 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACATTGTCTCAGAACACCACCTCTTCGGCCTGTGCACCGGAGACTGGCCTGCAACAACTGGTTGCCACCATAGT
CCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGGGTCT
TCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGGGCATTT
ATGGCCCCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAG
CCCGGAAGCCGCCGGCATTGCCGCCTGTCTGATGGCGTACAGCCATCACGCCTGTCGTACAGAGAATTATGCCATGACGG
TTCATTATTACCGGCTGCGGGATTATGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATCGACTGA

Protein sequence :
MKTLSQNTTSSACAPETGLQQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAF
MAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMAYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-69 99
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 6e-64 98
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 6e-64 98
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 9e-65 98
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 3e-58 90
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-57 88
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-57 88
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-57 88
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-61 88
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 5e-59 87
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-57 87
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-57 87
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 4e-63 87
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-63 87
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-62 87
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 3e-61 86
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 8e-62 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_1889 YP_003349879.1 hypothetical protein VFG0659 Protein 2e-64 98
ECSF_1889 YP_003349879.1 hypothetical protein VFG1677 Protein 4e-62 88
ECSF_1889 YP_003349879.1 hypothetical protein VFG1616 Protein 7e-63 87
ECSF_1889 YP_003349879.1 hypothetical protein VFG1527 Protein 3e-62 84