Gene Information

Name : ECSF_1855 (ECSF_1855)
Accession : YP_003349845.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1984536 - 1985759 bp
Length : 1224 bp
Strand : -
Note : -

DNA sequence :
ATGGGAACCATACAGAAGATAAGAACAGATGTTAATGTATTACATGCGGCCATTCACCGTATTGAGTGGTTGTTTGAGAC
ATTTTCATCTGTTTGTTTGTCTTTTTCTGGAGGAAAAGACTCTACTGTGCTGCTCCATCTTACGGCCGATGTGGCTCGCA
GGAAGAAACGTCGTTTCTCTGTATTATTCATTGACTGGGAAGCTCAGTACCAGTGCACAATTGCACACATTCTGAAGATG
AGGGAGATGTATCGGGATGTGACGGAGACTTTTTACTGGGTGGCACTCCCCCTGACTACGGTAAACGGTGTCTCTCAGTT
TCAGCCGGAATGGATATGCTGGGAACCAGGTGTGGAGTGGGTTCGTCAGCCACCAGATGACGCTATTACAGATATGTCGT
ATTTCCCATTTTATCGGTATGCCATGACGTTTGAAGAATTTGTTCCGGCATTTTCTTCCTGGTTTGCCGGTAACCGGTGT
GGAGTGGCAATACTGACTGGTGTTCGTGCTGATGAATCGCTCAATCGCTTTATGGGACTGGTGTCTCAGCGCAAACTGAG
ATATGCAGATGATAAACCCTGGACCACAGCGTCACCTGAAGGGTTTTATTACACCTTGTATCCGTTGTATGACTGGAAAG
CCCGTGATATATGGATATATAACGCCAGAACCCGAGCTATCTACAATCCCCTGTATGACCTGATGTACCGTGCCGGCGTG
CCGTTACGCAACATGCGGGTCTGTGAGCCTTTTGGCCCGGAACAGCGTAAGGGACTGTGGCTTTACCATGTTCTGGAGCC
GGAAACTTGGGCCAGGATGTGTGAGCGGGTGTCGGGTGCTGCCAGCGGGGCGCTTTATGCCAATGAGAGCGGTGCCTATT
TTGCCCTGCGTAAGCGTATCACGAAGCCGCCTCATCATACCTGGCGTAGCTATGCGATGTTCCTGCTGGATGTGATGCCG
GAAAGAACGGCAGAACATTACCGTAATAAAATTGCTGTCTACCTGCGCTGGTATCAGACGCGGGGCTTCCCGGATGACAT
CCCGGATGAACAGGAGAATGACCTGGGGAGCCGGGATATCCCGTCTTGGCGACGTATCTGTAAGACACTCATAAAGAATG
ATTTCTGGTGCCGGACCCTCTCCTTCAGTCCGAACAAACCCCGGCACTATGAACGTTATCTGCAGCGTATGAAAGAAAGG
AGGAAGGAATGGGGGATTCTGTGA

Protein sequence :
MGTIQKIRTDVNVLHAAIHRIEWLFETFSSVCLSFSGGKDSTVLLHLTADVARRKKRRFSVLFIDWEAQYQCTIAHILKM
REMYRDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVEWVRQPPDDAITDMSYFPFYRYAMTFEEFVPAFSSWFAGNRC
GVAILTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTLYPLYDWKARDIWIYNARTRAIYNPLYDLMYRAGV
PLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALRKRITKPPHHTWRSYAMFLLDVMP
ERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYERYLQRMKER
RKEWGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 0.0 96
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 0.0 95
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 0.0 94
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 93
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 0.0 93
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 0.0 93
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 0.0 93
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 0.0 93
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 6e-177 87
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 5e-177 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_1855 YP_003349845.1 hypothetical protein VFG1504 Protein 0.0 96