Gene Information

Name : ECSF_0168 (ECSF_0168)
Accession : YP_003348158.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : ferrichrome-iron ABC transporter ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 188238 - 189035 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTT
GCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTGACCGGTCTGATTGGTCACAACGGTTCTGGTAAATCCACTCTGC
TCAAAATGCTTGGTCGTCACCAGCCACCGTCGGAAGGGGAGATTCTTATTGATGCCCAACCGCTGGAAAGCTGGAGCAGC
AAAGCGTTTGCCCGCAAAGTGGCTTATTTGCCGCAGCAGCTTCCTCCGGCAGAAGGGATGACCGTGCGTGAACTGGTGGC
GATTGGTCGTTACCCGTGGCATGGCGCGCTGGGGCGCTTTGGTGTTGCAGATCGCGAAAAGGTCGAGGAAGCTATCTCGC
TGGTTGGCTTAAAACCGCTGGCGCATCGGCTGGTCGATAGCCTTTCTGGCGGCGAACGTCAGCGGGCGTGGATCGCCATG
CTGGTGGCGCAGGATAGCCGCTGTCTGTTGCTCGACGAACCGACTTCGGCGCTGGATATCGCCCACCAGGTTGATGTACT
GGCGCTGGTGCATCGTTTAAGTCAGGAGCGTGGCCTGACGGTCATTGCCGTGCTGCACGATATCAATATGGCGGCGCGCT
ACTGTGATTATCTGGTCGCCCTACGCGGCGGTGAAATGATTGCTCAGGGAACGCCTGCGGAAATTATGCGCGGCGAAACC
CTCGAAATGATTTATGGCATCCCGATGGGTATTCTGCCGCATCCGGCGGGTGCTGCACCTGTGAGTTTTGTTTATTGA

Protein sequence : 
MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILIDAQPLESWSS
KAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGVADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGET
LEMIYGIPMGILPHPAGAAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-43 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-43 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-45 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-38 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-38 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-38 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_0168 YP_003348158.1 ferrichrome-iron ABC transporter ATP-binding component BAC0164 Protein 8e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_0168 YP_003348158.1 ferrichrome-iron ABC transporter ATP-binding component VFG0925 Protein 8e-45 45
ECSF_0168 YP_003348158.1 ferrichrome-iron ABC transporter ATP-binding component VFG1042 Protein 7e-44 42