Gene Information

Name : ECSF_1284 (ECSF_1284)
Accession : YP_003349274.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : psp operon transcriptional activator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1375460 - 1376452 bp
Length : 993 bp
Strand : -
Note : -

DNA sequence : 
GTGGCGAATTTCATCATGGCAGAATACAAAGATAATTTACTCGGTGAGGCGAACAGCTTTCTCGAAGTGCTGGAACAGGT
TTCGCATCTCGCACCGCTGGACAAACCGGTGCTCATCATCGGCGAGCGCGGCACCGGTAAAGAGCTGATTGCCAGCCGTC
TGCATTATCTCTCCTCCCGTTGGCAAGGGCCGTTTATTTCCCTTAACTGCGCGGCGTTAAATGAAAATTTGCTGGATTCC
GAACTGTTTGGTCACGAAGCGGGGGCGTTTACCGGTGCGCAAAAACGTCATCCAGGGAGATTTGAACGTGCCGACGGCGG
TACGCTATTTCTTGATGAACTCGCTACGGCACCGATGATGGTGCAGGAAAAATTATTGCGTGTGATTGAGTACGGTGAAC
TGGAGCGCGTCGGCGGCAGCCAGCCATTGCAGGTGAATGTGCGGTTGGTATGCGCGACGAATGCCGATCTCCCGGCAATG
GTCAATGAAGGGACTTTTCGCGCTGACCTGCTCGACCGACTAGCGTTCGATGTTGTGCAACTGCCGCCACTACGCGAACG
TGAAAGCGACATTATGTTGATGGCAGAACACTTTGCCATCCAGATGTGTCGGGAAATCAAGCTGCCTCTGTTCCCGGGTT
TTACCGAGCACGCCAGAGAAACATTGCTGAATTATCGCTGGCCGGGAAATATACGTGAATTGAAAAACGTGGTGGAACGT
TCAGTGTATCGCCACGGCACCAGCGATTATCCGCTTGATGACATCATTATTGATCCCTTTAAACGCCGTCCATCTGAAGA
AGCCATCGCCGTTTCAGAAAACACCTCGCTTCCGACGCTGCCGCTGGATTTACGCGAGTTTCAGATGCAGCAGGAAAAAG
AACTGCTTCAGGTCAGCTTGGAACAAGGGAAGTATAACCAGAAGCGCGCCGCTGAATTGCTGGGGTTAACCTATCATCAG
TTCCGCGCGTTGCTGAAAAAGCACCAGCTTTAG

Protein sequence : 
MANFIMAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDS
ELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAM
VNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTEHARETLLNYRWPGNIRELKNVVER
SVYRHGTSDYPLDDIIIDPFKRRPSEEAIAVSENTSLPTLPLDLREFQMQQEKELLQVSLEQGKYNQKRAAELLGLTYHQ
FRALLKKHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 7e-36 41
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 7e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_1284 YP_003349274.1 psp operon transcriptional activator VFG1214 Protein 9e-47 42