Gene Information

Name : ECSF_1100 (ECSF_1100)
Accession : YP_003349090.1
Strain : Escherichia coli SE15
Genome accession: NC_013654
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1190863 - 1191777 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
ATGCGCTCAATAAAAAAAGTAACCATGCTCTTGGGGGGCCTCGCACTCACCTGCTCGATCGCATTTCAGGCAAGTGCAAC
TGAAAAATTTAAGGTCATTACAACATTTACCATCATCGCGGATATGGCCAAAAACGTGGCGGGAGATGCTGCAGAAGTCT
CATCCATAACCAAGCCTGGTGCAGAAATTCATGAGTATCAGCCTACCCCTGGCGATATTAAACGTGCGCAGGGGGCACAA
CTGATTCTCGCCAATGGTATGAATCTGGAATTGTGGTTCCAACGCTTTTACCAGCATCTCAATGGGGTTCCAGAAGTAAT
TGTCTCTTCGGGTGTGACGCCTGTAGGGATCACCGAAGGACCCTATGAGGGCAAACCTAACCCCCATGCATGGATGTCGC
CAGATAATGCTCTGATTTACGTCGATAATATTCGTGATGCGTTGATAAAATACGATCCGGCAAATGCACAAACCTACCAA
CGCAATGCCGATACTTATAAAGCCAAGATTACCCAAACCCTTGCCCCCCTGCGTAAGCAGATTACGGAACTCCCTGAGAA
TCAGCGATGGATGGTCACCAGTGAAGGGGCTTTTTCTTATCTCGCACGCGATTTGGGGCTAAAAGAGCTTTATCTGTGGC
CGATTAATGCCGATCAACAAGGAACACCGCAGCAGGTACGTAAGGTTGTTGATATAGTTAAGAAAAATCATATCCCGGCA
GTCTTTAGCGAGAGTACGATTTCCGATAAACCAGCGCGTCAGGTTGCGCGTGAAACCGGCGCACACTACGGCGGTGTGCT
CTATGTCGATTCCCTGAGCACAGAAAACGGCCCGGTACCGACGTATATCGACCTTCTTAAGGTTACTACCAGTACGCTGG
TACAGGGAATTAAAGCCGGGAAAAGGGAGAAATAA

Protein sequence :
MRSIKKVTMLLGGLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQ
RNADTYKAKITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPA
VFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYIDLLKVTTSTLVQGIKAGKREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-111 75
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-111 75
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-111 75
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-111 75
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-111 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_1100 YP_003349090.1 iron ABC transporter substrate binding component BAC0349 Protein 1e-111 75
ECSF_1100 YP_003349090.1 iron ABC transporter substrate binding component BAC0439 Protein 7e-91 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSF_1100 YP_003349090.1 iron ABC transporter substrate binding component VFG0525 Protein 1e-111 75