Gene Information

Name : Tnap_0828 (Tnap_0828)
Accession : YP_003346334.1
Strain : Thermotoga naphthophila RKU-10
Genome accession: NC_013642
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 861979 - 864441 bp
Length : 2463 bp
Strand : +
Note : PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; KEGG: tpt:Tpet_0726 ATPase

DNA sequence :
ATGTTTGATAAGTTCTCGGAAAAGACAGCCCAGATATTCGTAACAGCCCAGGAGGAGGCAAAAGAACTCGGGCATTCGTA
CGTCGGAACAGAGCATCTTCTGCTTGCAATCTTGAAAGTAGATAGAGGACCCGTCGTCGAACTCCTGGAGGAAATGGGCG
CTTCGTACTCCAAGGTGAGATCGGAGATCATCTCCATGGTTGGTATGGGGATGAGGGGTTTCGTCCCCTCTCCACAGATG
ACTCCAAGAGCCAAGAGAGTGACCGAGCTCGCATACGAAGAGGCGAAGATCCTTGGAAGTGACAAGATAAACCCGGAACA
TCTTCTCCTTGGTATCCTGAGAGAGGGAGAAGGGATAGCTATCCATATCTTGAGAAAACTCGGAGTAGACATCGCCACTC
TGAGAAGAGAGATCATTGATATCTACTCCTACTCTTCGAACAAAAGTCTGGAATATGAAGAAGAAGAGGATTACACTTAC
AGAAGTGTGAAACAACTTGAAGGCTTCGGTGTGAACCTCACGGAACTTGCAGCCAAGAAAGAACTCGACCCAGTTATTGG
AAGGGAAGAAGAGATAGAAAGAGTGATGCAGGTTCTTGTCAGAAGGAAGAAAAACAATCCTGTTCTCATAGGAGATCCCG
GGGTTGGAAAGACGGCGATAGTTGAAGGTCTGGCTCAGAGAATAGTCACTGGAGATGTGCCTGAAATCTTGAAAAACAAG
GTGATCTTCTCTCTTGACGTGGCAGCGCTGGTTGCAGGAACCAAGTACAGAGGTGAATTCGAAAAGAGGATGAAAAAACT
TCTCCAGATTGTAACCAAGGATAAGAACATCATCCTCTTCATAGACGAGATACACACCATAGTTGGTGCTGGATCGGCTG
AGGGAGCGATCGATGCCGCGAACATTTTGAAACCCGCTCTCGCACGTGGAGAGATAAGTTGTATAGGTGCTACCACACCG
GACGAATACAGAAAGTACATTGAAAAAGATGCTGCTCTGGAGAGAAGGTTTCAGAAGATATATGTGAAAGAACCAACCGA
AGAAGAAACACTCGAAATACTGAAAGGTTTGAAGAGAAAATACGAGTCGCATCATAAGGTGATTTATACCGACAAGGCTC
TGGAGGCGGCCGTTTATCTTTCCAAGAGATACATAACCGACCACTATTTACCGGATAAGGCGATCGATGTGATAGACGAA
GCAGGTGCCAGAGCGAGGTTGAAGGTTTTCGTGCTTCCTCCAGAACTGAAGAGTATGAAATTAGAACTAGAGAAGATAAG
GAGTGATAAGGAGCTCGCTGTTCTGAATCAGGATTATGAAAAAGCGGCCCAACTGAAAGAAGAGGAAATGGAGCTGGAAG
CGGAATATAGAAAGAGGTACGCGGAATGGAGAAGACACGCGGAAACGGCCGTAGTGAGGGTAGACGTGGATGATGTGGCT
GAGGTGGTGTCTTCCTGGACGGGTGTACCTCTCAAAAAGATCGAGGAAACGGAAGTCGAAAAGCTCCTCAATCTCGAGGA
GGCTCTCCACCAGAGAATTGTTGCTCAGGACGAAGCTATAAAAGCCGTAGCCAGGGCCATAAGAAGAGCAAGAAGCGGTC
TGAAAGATCCAAGAAGACCGATAGGTGTGTTCTTGTTCCTCGGTCCAACGGGTGTTGGAAAGACAGAACTCGCAAAAGCA
CTCGCAGAGTATCTGTTTGGGGATGAAAGGGCCCTCATCAGGTTCGATATGAGTGAATACATGGAGAGGTTCTCCGTTTC
AAGACTCATAGGTGCTCCTCCGGGATACGTTGGTTACGAAGAGGGAGGAACTCTCACGGAGAAAGTGAGAAGAAGGCCGT
TCTCGGTGATCCTGTTCGACGAAATAGAGAAGGCGCATCCAGATGTATTCAACATACTGCTCCAGATAATGGACGACGGA
AGACTCACGGATTCTCAGGGACGTGAAGTCGATTTCAGGAATACGATCATCATCATGACCAGCAACATCGGAAGTTCTTA
CATCAACAAATCCAAGAGAACACTCGGGTTTGTGGGTGACAACAACGAGGAGAAAGAATTCGAGAAAATAAAGGATCTCG
TTCTGGAAGAGGTGAAAAGAACGTTCAGACCCGAGTTCCTGAACAGGATCGATGAAACAATTATCTTCCATCCATTGAAT
AAAGAACACATTGAACAGATCATCGATATACTCTTGAGAGATCTAAGGAAGAGACTCTCGGAGAAGAACATGAAGCTTGT
ACTGACAAAGAGTGCAAAGGAGTTCTTGGTTGAAAAGGGATTCGATCCGGTTTACGGAGCAAGACCTCTGAAGAGAGCTA
TACAGAGATACGTGGAAGATCCTCTCTCCGAGGAAATTTTAAGAGGCAAGTTCAACGAAGGAGATACGATTGTCTGTAGT
GCACGCAAAGATGCTCTCCGATTCACCAGAAAGGGTGAAAAGAAAGAGAAGGTGGTTCAGTGA

Protein sequence :
MFDKFSEKTAQIFVTAQEEAKELGHSYVGTEHLLLAILKVDRGPVVELLEEMGASYSKVRSEIISMVGMGMRGFVPSPQM
TPRAKRVTELAYEEAKILGSDKINPEHLLLGILREGEGIAIHILRKLGVDIATLRREIIDIYSYSSNKSLEYEEEEDYTY
RSVKQLEGFGVNLTELAAKKELDPVIGREEEIERVMQVLVRRKKNNPVLIGDPGVGKTAIVEGLAQRIVTGDVPEILKNK
VIFSLDVAALVAGTKYRGEFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEISCIGATTP
DEYRKYIEKDAALERRFQKIYVKEPTEEETLEILKGLKRKYESHHKVIYTDKALEAAVYLSKRYITDHYLPDKAIDVIDE
AGARARLKVFVLPPELKSMKLELEKIRSDKELAVLNQDYEKAAQLKEEEMELEAEYRKRYAEWRRHAETAVVRVDVDDVA
EVVSSWTGVPLKKIEETEVEKLLNLEEALHQRIVAQDEAIKAVARAIRRARSGLKDPRRPIGVFLFLGPTGVGKTELAKA
LAEYLFGDERALIRFDMSEYMERFSVSRLIGAPPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNILLQIMDDG
RLTDSQGREVDFRNTIIIMTSNIGSSYINKSKRTLGFVGDNNEEKEFEKIKDLVLEEVKRTFRPEFLNRIDETIIFHPLN
KEHIEQIIDILLRDLRKRLSEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKRAIQRYVEDPLSEEILRGKFNEGDTIVCS
ARKDALRFTRKGEKKEKVVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tnap_0828 YP_003346334.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 54
Tnap_0828 YP_003346334.1 ATPase AAA-2 domain protein VFG0080 Protein 1e-137 53