Gene Information

Name : Tnap_0054 (Tnap_0054)
Accession : YP_003345576.1
Strain : Thermotoga naphthophila RKU-10
Genome accession: NC_013642
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 48133 - 50511 bp
Length : 2379 bp
Strand : -
Note : PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; KEGG: tpt:Tpet_0054 ATPase

DNA sequence :
ATGAGAAACCTGAACGACAAGATGAAGGATATTTTCGAAAGGAGTGTGGAGGATATCAAAGAAAGAAATCAGAACCTGCT
CAGACCAGAACACATTCTCCTTCAGATTCTTTACGATGAAAACGAGGCCACGAAGGTACTGAAAGATCTCAATGTAAACG
TGGAAGAAGTGATTACTGAGCTGGAGGACTACATCGATTCCCAGTACGGGATATACTACGGATTCTCCGATCAGGTCTAT
GTATCGAAAGAGCTTTCTTACATCCTGGAGCTGGCGAGAAAGGAAGCCAGACTCTTCAAGCAGAGGGATGTAGGTCCTCT
TCACTTCCTTCTAGGACTGTTGAGAGACGGTTCCACGCACGCTGCCCGTGTCCTGAAAAAGTACGGCGTTGACTACGAAA
AAGTGCTTCAGAAGATTAGGGAGCACGAAGAAGAGTACGCGACCGAACAGTCACCGCTCACGGCTTTTGCAACCGATCTC
ACAAAATTGGCAAAAGAGGGGAAAGTAGGCCCTATCATAGGAAGGGACAAAGAAATCGAGCGCGTGATTGAAATTCTCAT
GAGAAAAACCAAGAACAACCCAATTCTAATCGGTGATCCAGGTGTTGGAAAAACCGCTATTGTGGAAGGTCTCACACAGA
GAATCGTTGAGGGGAAAGTCCCTGATCCTCTAAAAGATGTGCGCATACTGATGGTGGATCTCGGAAGGATGATAGCGGGA
ACCAAGTACAGGGGAGAGTTTGAAGAAAGGCTGAAATCGTTCCTCGATGAAGTGATGAAACAGAAAGAAAAAACGATTCT
CTTCATCGATGAAATACACACCCTGGTTGGTGCTGGCGCAGCCGAGGGAGCGATGGACGCTGCCAACATGTTGAAGCCGG
CCCTTGCTCGCGGTGAAATACGCGTCATAGGTGCGACCACGCTGGATGAGTACAGAAAACACATAGAAAAAGACAAAGCG
CTCGCGAGAAGATTCCAGCCGGTGATGGTGAGAGAACCGAGTGTGGAGGAGACCATAGAGATCTTGAAAGGGTTGAAGAA
AGTCTACGAGGAGCACCACAAAGTGAAGATAGAAGACGAAGCGATAGAGGCAGCTGCCAAGCTCTCAGCGAGGTACATAA
CAGACAGATTCTTGCCGGACAAGGCGATTGACCTGTTGGATGAAGCGGCAGCAAGAGTGAGACTCAGCGCTACAAAACAG
GAAAAGGATGAAACGAAGCTTCGCGAGCTCGAAGAAAAAATAAAAGAGCTTGAAGCAAAAATCGACGAGCTCACTATAAG
ATCTCAGTACAAAGAAGCGGCCGATCTCAAGAAAGAACTCTTCAAACTCAGGAACGAGTACGAAGCTTTGAAGAGTGGGA
AACCGGTTGTCACAGCGGAGAAAATAGCAGAAGTGGTTGAATCCTGGTCTGGTGTACCAGTTTCCAGAATCGTTGAGTCT
GAAAAGGAAAAGCTTCTGAAGCTCGAAGAGATAATCCACCAGAGACTCGTGGACCAGGAGGAAGCGGTCAAGGTAGTGGC
CGATGCCATCAGGAAGGCAAGGGCTGGAATAAAAGATCCTAACAGGCCAGTTGGTACCTTCCTCTTCCTTGGACCAACGG
GTGTTGGTAAGACTGAGCTCGCAAAGACACTCGCTGAAGTGCTCTTTGGAAGCGAAAACGCACTGATACGAATCGACATG
ACCGAATACATGGAAAAGCACGCTGTCTCCAAGCTGATAGGAGCACCTCCGGGATACGTCGGTTACGAGGAAGGTGGTCA
GCTGACCGAAGCCGTAAGAAGAAGACCGTACAGTGTCGTACTGCTTGATGAGATTGAAAAGGCGCATCCGGATGTGTTCA
ACGTACTGCTTCAGATAATGGACGACGGAAGACTCACAGACAGCAAAGGAAACGTTGTGGATTTCAAGAACACGATCATC
ATCATGACGAGTAACATAGCAAGCGATCTGATACTGAACTACGTTAAAGAAGGAAAGAGCTTCGATGAGATTGAAGAAAG
AGTCAGAGAAGAGCTGAAACACTACTTCAGACCCGAGTTCATAAACAGGATAGACCACGTTGTTGTCTTCAAACCGCTTA
CAAAAGAACACATGAAACAGATCGTGGAAATAATGATTAGAAGACTTGAAGCGCGGTTGAAGGACAAGAACATAAAACTC
ACGATCACCGAATCGGCGAAAGAATACCTCGCAGAAGAAGGATACGATCCAACGTTCGGTGCAAGACCGCTGAGGCGGCT
GATAGAAAGGGAAATAGAAACACCACTCGCAAGGATGATCATAGCAGGTGAAGTGCAGGAAGGTCAGACGGTGAGAGTGG
ATTACAACGGTGAAAAATTGATCCTCGAAGTTGCCAGAGAACTCGAGAAGGTTCAGTAA

Protein sequence :
MRNLNDKMKDIFERSVEDIKERNQNLLRPEHILLQILYDENEATKVLKDLNVNVEEVITELEDYIDSQYGIYYGFSDQVY
VSKELSYILELARKEARLFKQRDVGPLHFLLGLLRDGSTHAARVLKKYGVDYEKVLQKIREHEEEYATEQSPLTAFATDL
TKLAKEGKVGPIIGRDKEIERVIEILMRKTKNNPILIGDPGVGKTAIVEGLTQRIVEGKVPDPLKDVRILMVDLGRMIAG
TKYRGEFEERLKSFLDEVMKQKEKTILFIDEIHTLVGAGAAEGAMDAANMLKPALARGEIRVIGATTLDEYRKHIEKDKA
LARRFQPVMVREPSVEETIEILKGLKKVYEEHHKVKIEDEAIEAAAKLSARYITDRFLPDKAIDLLDEAAARVRLSATKQ
EKDETKLRELEEKIKELEAKIDELTIRSQYKEAADLKKELFKLRNEYEALKSGKPVVTAEKIAEVVESWSGVPVSRIVES
EKEKLLKLEEIIHQRLVDQEEAVKVVADAIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDM
TEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVFNVLLQIMDDGRLTDSKGNVVDFKNTII
IMTSNIASDLILNYVKEGKSFDEIEERVREELKHYFRPEFINRIDHVVVFKPLTKEHMKQIVEIMIRRLEARLKDKNIKL
TITESAKEYLAEEGYDPTFGARPLRRLIEREIETPLARMIIAGEVQEGQTVRVDYNGEKLILEVARELEKVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 8e-156 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tnap_0054 YP_003345576.1 ATPase AAA-2 domain protein VFG0079 Protein 9e-168 50
Tnap_0054 YP_003345576.1 ATPase AAA-2 domain protein VFG0080 Protein 2e-137 50