Gene Information

Name : Tnap_1560 (Tnap_1560)
Accession : YP_003347050.1
Strain : Thermotoga naphthophila RKU-10
Genome accession: NC_013642
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3839
EC number : -
Position : 1549450 - 1550517 bp
Length : 1068 bp
Strand : +
Note : PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: trq:TRQ2_1586 ABC transporter related

DNA sequence : 
TTGGCGCAGGTGAAAATAGACGGAGTGAAGAAATATTTCGGGAATGTGAGGGCTCTCGATGGAATCGACCTTGTCGTGAA
CGAAGGGGAGTTCCTCGTTCTTCTCGGTCCATCTGGTTGTGGAAAGACGACCCTTCTGAGGTGTATAGCGGGTCTCGAAC
AGGTGACCGGGGGAAAGATCTTTTTCAACGATCGCGACGTGACGAACCTTCCTCCAAAGGACAGGAACATTTCGATGGTC
TTCCAGAGCTACGCGGTGTGGCCCCACATGAAGGTGTACGACAACATCGCGTATCCTCTGAAACTGAAAAAAGTCCCGAA
AGAGGAGATAGAAAAGAGGGTAAAGTGGGCAGCGGATCTCCTTCACATCTCCGAACTCCTCGACAGGTACCCCGCACAGC
TCTCCGGAGGTCAGAGACAGAGGGTTGCCGTTGCCCGAGCGATCGTTCACGAACCCGAAGTACTCCTGATGGACGAGCCT
CTTTCCAATCTGGACGCACTTTTGAGGGTGAAGATGAGAAGCGAGCTGAAAAAGCTTCAGGAAAGAATTGGAGTCACCAC
CATCTATGTGACTCATGACCAGACAGAGGCCATGACGATGGGAGACAGAATCGCGGTGATGAACCAGGGAAAGCTTCAGC
AGGTTGGAACGCCCTCTGAGATCTATCACCATCCGGTGAACATCTTCGTCGCTGGTTTTGTGGGATCACCGCAGATGAAC
TTCTTAGAGATGGAAGTGAGATCGGAAGGAAATAGCGTTGTTCTCCAAAACGGTGAGATAAAGATTCCCGCGAAGACCGA
TCCAGGTGCAAAAAAGGTGATCCTTGGTATTCGACCGGAGAACGTCTATCTGGAGGAAAAGCCGAACACTTTGAAGCTGG
AAGGAGAGGTTTATTTCGCCGAGAAACTCATGTCGGATACGATTCTCCATCTCAACGTTGGAAGTGAGAAGATCGTCGCA
AAAATTCCAGGGGATGTGGATTTCAGAAGCGGTGAGAAGATCACGTTTTTCCTGGACGTTGAAAAGATCCATCTCTTTCA
CCCTGAGACGGGAGAGAGAATCTCATGA

Protein sequence : 
MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKIFFNDRDVTNLPPKDRNISMV
FQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAADLLHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEP
LSNLDALLRVKMRSELKKLQERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFVGSPQMN
FLEMEVRSEGNSVVLQNGEIKIPAKTDPGAKKVILGIRPENVYLEEKPNTLKLEGEVYFAEKLMSDTILHLNVGSEKIVA
KIPGDVDFRSGEKITFFLDVEKIHLFHPETGERIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-38 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tnap_1560 YP_003347050.1 ABC transporter BAC0604 Protein 3e-48 44