Gene Information

Name : Tnap_1412 (Tnap_1412)
Accession : YP_003346908.1
Strain : Thermotoga naphthophila RKU-10
Genome accession: NC_013642
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1408925 - 1411300 bp
Length : 2376 bp
Strand : -
Note : PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; KEGG: tma:TM1391 ATP-dependent Clp protease, ATPase subunit

DNA sequence :
ATGTTCAATCTGGAAGAGTACACTGAAAAGGCTCAGAAGGTAATGATGAGCATTCAGGATATAATGACCCGATACAGACA
AAACCAGCTTTCCAGTGAACACATACTGCTCGCGATACTGGAAGAAGGAAACAACGTTGGCGTTGAACTTCTGAAAGAGT
TGAACGTGGATATAAACAGACTCAGAGATGAAGTGGAGGTGTTCATTGGGAAATACGGGGTTAGAGTCCCTGAAGGAGCA
TCTGTTTCTCAGATTTTCATAACCCCAGACGCAAGGCATGTCATTGAGAAAGCACGAGAAGAAGCGAGAAGAATGGGAGA
CTCAAAAATAGGAACCGAGCACCTTATTTTGGGTATGGTACTGTCACCTGATTCCACGGCATTTCGAATTCTCTCGAGAT
ACGGTGTAACACCTGAGAGAGTCTATGAGGCCATAAGGAAGATCAGGTCAACGGGTAAAACAGATGAGGCAGAGAACGTG
GAAGCGCTCGCTCGCTTCACAATGGATCTCACACAGCTAGCCCGCGAAAAAAAGCTCATGCCCGTAGTGGATCGTGAAAA
GGAAATCAGAAGGGTGATACAGATACTGTCCAGGAGAACGAAGAACAACCCGGTTCTCGTAGGAGACCCGGGAGTGGGAA
AGACTGCCGTCGTCGAAGGGCTCGCCCAAAGAATAGTTGAAGGAAAAGTCCCTCTGTTTTTGAGAAACGTCAGAGTCTTG
AAGCTTGACATGGGGAGGCTGGTAGCAGGGACCCGTTTCAGAGGAGATTTTGAAGAAAGACTGAAACGTCTCCTCGATGA
ATTGAAGAGGAAAAAAGGAGAAGTAATACTCTTCATCGACGAGGTGCACACGGTGGTAGGAGCAGGAGCTGCTGAAGGTG
CTCTTGATGCTGCGAACATAATGAAACCAGAACTCACAACGGGGGAGATTCAGATAATAGGAGCGACCACCGTTGAAGAG
TACAGAAAATACATAGAGAAAGACAGGGCACTTGAGAGAAGATTCCAGCCGGTCATGGTGGAAGAGCCGACGGTCGAACA
GACAATCGAAATACTGAAAGGGTTAAGAAAGGTCTTTGAAGAGCATCATCACGTGAAAATAACAGATGACGCTCTGGAAG
CTGCGGCGAAACTCTCCGCGCGATACATAACCAACAGATTCCTCCCGGACAAGGCCGTTGATCTGATAGACGAAGCAGCT
GCGTACGTGCGCCTCGAATCCTCGTACCCTTCAGAAGAACTCCTGAAACTCGAAGAAGAGATCAAAAACCTTGAAGACAA
AATAAACGACGCCGTTGTGAAGGGAGAATACGAAGAAGCGGCAAAACTGAAGGTCGAACTCCAGAAATTGAAAAAAGAAT
ACGAAGAAAAGAGAAAAAAAGAAGAAAAGGTGGAACCCCATGTCGATGAAAACGTCGTGGCGAAGATCGTGGAACAGTGG
ACAGGCATTCCCGTATCTCGAATCATGGAATCTGAAAGAGAGAAACTACTGAAACTCGAAGAATTCATCCACCAGCGCCT
GGTGAATCAGGAGGAAGCCGTAAAGATAGTGTCGCGGACCATAAGACGCGCGAGGGTCGGTATCAAGAACCCGAGAAGGC
CCATCGGTGTCTTTCTGTTCCTCGGACCAACGGGCGTGGGAAAGACAGAACTCGCCAGAACTCTCGCAGATGTGCTCTTC
GGCAGTGAAGACGCCATGATCAGGCTCGACATGAGTGAGTACATGGAGAAACACTCCGTTGCCAGACTCATAGGGGCACC
TCCGGGTTACGTGGGTTACGAAGAGGGAGGACAGCTCACCGAGGCTGTGAGAAAAAGGCCTTACAGTGTGATTCTCCTCG
ATGAGATAGAAAAGGCACATCCAGACGTATTCAACATCCTGCTTCAGGTGTTCGAAGACGGGCGATTGACCGATGGAAAA
GGAAACACTGTGGACTTCAGAAACACCATCATCATCATGACGAGCAACATAGGAAGCGAGAAGATCCTCGAAATGTCGGA
AAACGGTGTGAGAATTGAGATAGAAAGAGAACTTCGAAACACCTTCAAACCCGAGTTCCTGAACAGAATAGACGCAATAG
TCTACTTCAAACCGCTCACGATGGAAGAGGTGAAGAAGATAGTGGAAATCATGGTGAGACAGCTCCAGGAAATACTGAAA
GAGAAGAACATCTCCATCGAGCTCACAGAAAGGGCGAAAGATTACCTGGCAGAGGCGGGTTACGTGCCGTCTCTCGGTGC
AAGACCGCTTCGAAGAATCATAGAACTCGAACTCGAGTCGATGATAGCGGATAAAATACTGGAGGGAGAGATAAAAGAGG
GAGACAGGGTTCTGGTCGACGCGGACGAATACGGTCTGAAGATAGAGAGGAGGTGA

Protein sequence :
MFNLEEYTEKAQKVMMSIQDIMTRYRQNQLSSEHILLAILEEGNNVGVELLKELNVDINRLRDEVEVFIGKYGVRVPEGA
SVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMVLSPDSTAFRILSRYGVTPERVYEAIRKIRSTGKTDEAENV
EALARFTMDLTQLAREKKLMPVVDREKEIRRVIQILSRRTKNNPVLVGDPGVGKTAVVEGLAQRIVEGKVPLFLRNVRVL
KLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGALDAANIMKPELTTGEIQIIGATTVEE
YRKYIEKDRALERRFQPVMVEEPTVEQTIEILKGLRKVFEEHHHVKITDDALEAAAKLSARYITNRFLPDKAVDLIDEAA
AYVRLESSYPSEELLKLEEEIKNLEDKINDAVVKGEYEEAAKLKVELQKLKKEYEEKRKKEEKVEPHVDENVVAKIVEQW
TGIPVSRIMESEREKLLKLEEFIHQRLVNQEEAVKIVSRTIRRARVGIKNPRRPIGVFLFLGPTGVGKTELARTLADVLF
GSEDAMIRLDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDGK
GNTVDFRNTIIIMTSNIGSEKILEMSENGVRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIVEIMVRQLQEILK
EKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILEGEIKEGDRVLVDADEYGLKIERR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-154 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tnap_1412 YP_003346908.1 ATPase AAA-2 domain protein VFG0079 Protein 4e-173 51