|
Name : Tnap_1260 (Tnap_1260) Accession : YP_003346759.1 Strain : Thermotoga naphthophila RKU-10 Genome accession: NC_013642 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1281142 - 1282959 bp Length : 1818 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; CoA-binding domain protein; KEGG: trq:TRQ2_1211 polysaccharide biosynthesis protein CapD DNA sequence : ATGGTAAGAAAGGCACTCCTTTTTGTAATCGACGTGGCTCTGACGTACTTTGCGGGTGTAGTGGCGCTCTTTTCGAGGTT TGGTTTTGACTTTCAGGAAATGAGCCGTTATGACGAATCCGTGATCGTATACACCGCTGTCTCGGCTGTTGTCTACATTC TGAACGGAAACTATTCCATCGTGTGGGAATACGCTAATGCCAGAGACTTTCTCATTCTCATAAGAGGAAGCGTTATCTCT TATCTTTCCAACCTTGCGTTTTTTTATGTTTACAGGGGAATAGTTCTTCCCAGATCCGTGGGGTTTGCCACCTTTCTTGG TTCGATGGCCCTTCTTGTGCTGAGCAGGATCACATGGCAGTGGCTGACTGTGAACAGGCTAAGAAAAACCTCAGGGGAGA AGAGAATACTGGTCATAGGGGCAGGAGATGCGGGAGTCTCTATTCTCGAAGAATTTGAGAAACACCCCCATTTAGGAAAA ATAGTGGCCTTCGTGGACGATTCTCCCAGAAAGATCGGTCGAAAGGTGAGGGGAGTTCCGGTTTTTGGACCAATAGAGAA AACAATGGAATTCGTGGAGAAAATGAACGTGGACGAAATCGTGATAGCTATACCTTCAGCTTCCAGAGCTGAGATGGAAC GAATTCTCAAAAGCATCGATTTGAAAAAGGTCAGAGTAAAGACCCTCCCCAGTGTGAGAGAGCTGATAGAAGGACGTGTC AGGATCTCCCATCTGAAGGAAATATCCATAGAAGATCTTCTGGGTCGCGAAGAAGTGAAGGTGGATTTTCATGAAATAGG AAAATTCTTGAAAGGGAAGAAAATTCTTGTGACCGGAGCAGGAGGCAGTATCGGTTCTGAGCTTTGCAAGCAAATAGCCA GGATGAATCCAGCGGAGATCTTTCTTCTGGGCCACGGAGAAAACAGTATATATCTCATAAACGAGTTTCTCACCGAACAC TTTCCGGAGGTGAAGAAAAAAAGGATCATAGCGGATGTTGCCGACAGAAAGATAATGGAACACTGGTTGACCCAGCTGAG GCCGGACGTGATCTTCCACGTGGCAGCACACAAGCACGTTCCTTTGATGGAGGAAAATCCGCTTGAGGCTTTCAGAGTGA ACGTTCTGGGAACGATGAATCTCGTGGAACTCTCCGAAAGGCTCGGTGTTAAGTATTTTGTTTTCATCTCGACAGACAAA GCGGTGAATCCCACTTCTGTGATGGGCCTCACCAAGAGGATAGCGGAACTCTACATCCTTTCGAGAGAAAAAAACAGCAC GAATTTCTCGATCGTGAGGTTTGGAAACGTTCTTGGAAGCAGGGGAAGCGTAGTGGAAAAATTTCGCCGTCAGATAGAAA AAGGTGGGCCTGTAACGGTGACGGATCCACGAATGAAGCGCTACTTCATGTCCATACCTGAGGCCGTCTCCCTCATTCTC CAGTCCCTTCTCTTCTCTTCCGGAAAGGACCTCTTCATTCTCGACATGGGAGAGCAGATACCCATCCTGAAGCTTGTGGA AACCATGATCATGCTCTCTGGGTACACCCCTTACCAGGACATAAAGATAGTTTTCACCGGAATCAGGCCGGGGGAGAAGA TGTACGAAGAGTTGCTCTACCCTTACGAGATGAAAGAGTTGACTCCACACTCGAAAATCTTCAGAGTGAAGACATCCGTT CTTCCAGGGAAAGAGAGCGTAGAACAGGCAATCAACAGAATGAAAGAAGCCTTCGAAAACAGCGACGTAAAAGGACTTCT CACCGAAATGAAAAAATTAGTCCCGGAGGCACAAATAAATGTGGGAAGCGATAATTAG Protein sequence : MVRKALLFVIDVALTYFAGVVALFSRFGFDFQEMSRYDESVIVYTAVSAVVYILNGNYSIVWEYANARDFLILIRGSVIS YLSNLAFFYVYRGIVLPRSVGFATFLGSMALLVLSRITWQWLTVNRLRKTSGEKRILVIGAGDAGVSILEEFEKHPHLGK IVAFVDDSPRKIGRKVRGVPVFGPIEKTMEFVEKMNVDEIVIAIPSASRAEMERILKSIDLKKVRVKTLPSVRELIEGRV RISHLKEISIEDLLGREEVKVDFHEIGKFLKGKKILVTGAGGSIGSELCKQIARMNPAEIFLLGHGENSIYLINEFLTEH FPEVKKKRIIADVADRKIMEHWLTQLRPDVIFHVAAHKHVPLMEENPLEAFRVNVLGTMNLVELSERLGVKYFVFISTDK AVNPTSVMGLTKRIAELYILSREKNSTNFSIVRFGNVLGSRGSVVEKFRRQIEKGGPVTVTDPRMKRYFMSIPEAVSLIL QSLLFSSGKDLFILDMGEQIPILKLVETMIMLSGYTPYQDIKIVFTGIRPGEKMYEELLYPYEMKELTPHSKIFRVKTSV LPGKESVEQAINRMKEAFENSDVKGLLTEMKKLVPEAQINVGSDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-80 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tnap_1260 | YP_003346759.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-79 | 41 |
