|
Name : Tnap_1101 (Tnap_1101) Accession : YP_003346602.1 Strain : Thermotoga naphthophila RKU-10 Genome accession: NC_013642 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1135514 - 1137022 bp Length : 1509 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tpt:Tpet_1001 lysyl-tRNA synthetase DNA sequence : GTGTTAAAAGAGTTCAAAGAACAACGACTCAATGAGATACAGGAACTTCGTTCCATGGGTATAGAGCCATATCCTTACAA ATTCGAAAAAGAACTCACTGCCAGGGAAATAAGGGAAAAGTACGACTATCTCCAAGCTGGAGAAGTTCTTGAATCTGAAA AACTCTCTTTCGCAGGGAGAGTCATGTCGATACGCCACCATGGAAAGACGGCCTTCTTTCACATGAAAGATGACACAGGT CGAATCCAGGCTTACGTAAGGGCAGATTCTGTTGGAAAGGAAAAAATGGATCTCTTCAAAAGACACGTCAAAATAGGTGA CTTTATAGGAGTAAGAGGCTTTCCGTTCAAAAGCAAAACCGGAGAGTTGACCATTTACGTTCAAGAATACACGCTTCTGA GTAAGGCTCTACGTCCCTTGCCCGAGAAGTGGCACGGCATAAAAGATAAGGAAATCATATACAGGCAGAGGTACCTCGAA CTCATCGTAAGCGACGAGGCTATTGAGAGGTTCAGAAAGCGCTTCAAGGCTGTTCAAGTGATACGGGAATTTCTCAACAG CAGGGGATTCATCGAGGTGGAAACGCCTATCCTCCATTACGTCACAGGTGGTGCGGAAGCGAGACCTTTTGTGACCCACC TAAACGTTTTTGATATAGATATGTATCTGAGAATCGCACCGGAGCTTTACCTGAAGAGGTTGATCATCGGCGGTTTTGAG AAGATATACGAGATAGGAAAGAACTTCAGAAACGAAGGAATATCTTACAAACACAGTCCCGAGTTCACCAGCATAGAAAT CTACCAGGCTTACGCGGATTACAACGATATGATGGATCTCACTGAAGAACTGATAGTGGAAGTTGTGAAAAGAACATGCG GCACCTTGAAAATCTCCTACCAGGGCAAGGAGATAGACTTCACACCACCCTGGAAAAGAGTGAGAATGAGAGACTTTCTC AAAGAAAAACTCGGGGTGGACATCCTCGAAGATCCCGATGAAGTGTTGTTGAAGAAGCTCGAAGAATATGGAGTGGAACT GGAAATAAAGAACAGAGCACACCTCATAGATAAACTCAGAGATCTGGTGGAAGAAGAACTGGTGAATCCCACCTTCATAA TCGATCATCCTGTGGTGATTTCCCCTCTTGCCAAAAGACACCGAGAGGATCCTAGACTCACGGAAAGGTTCGAACTCATC ATATTTGGAAGGGAGATCGCGAACGCGTTCAGTGAGCTGAACGATCCCGTTGATCAATACCAGAGATTTCTCGAACAGGC GAAAATGAGAGAAGAGGGGGACGAAGAAGCACACATGATGGATCTCGATTTTGTGAGGGCCCTCGAGTATGGAATGCCTC CCACGGGAGGACTGGGAATCGGTCTTGACAGGCTCTTCATGTTCATCACAGATTCCCCCACAATAAGGGATGTGATTCCC TTCCCAATTGTGAAACCCCAAAAATTCGAGGAAGAAGAGGCGGAATTCGAAGGAGGGTTTGAAGAATGA Protein sequence : MLKEFKEQRLNEIQELRSMGIEPYPYKFEKELTAREIREKYDYLQAGEVLESEKLSFAGRVMSIRHHGKTAFFHMKDDTG RIQAYVRADSVGKEKMDLFKRHVKIGDFIGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLE LIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMYLRIAPELYLKRLIIGGFE KIYEIGKNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWKRVRMRDFL KEKLGVDILEDPDEVLLKKLEEYGVELEIKNRAHLIDKLRDLVEEELVNPTFIIDHPVVISPLAKRHREDPRLTERFELI IFGREIANAFSELNDPVDQYQRFLEQAKMREEGDEEAHMMDLDFVRALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIP FPIVKPQKFEEEEAEFEGGFEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-95 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tnap_1101 | YP_003346602.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-95 | 45 |
