Gene Information

Name : Sros_0961 (Sros_0961)
Accession : YP_003336708.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 980787 - 981476 bp
Length : 690 bp
Strand : +
Note : KEGG: baa:BA_0573 REC, CheY-homologous receiver domain

DNA sequence :
GTGACTCGCGTGCTTGTTGTCGAGGACGAGGAGTCGTTCTCCGACGCCCTGTCGTACATGCTGCGCAAGGAGGGTTTCGA
GGTCGCGGTCGCGGCCACCGGCCCCGAGGCGTTGGACACTTTCGACCGTAACGGCGCCGATCTGGTGCTGCTCGACCTGA
TGTTGCCCGGCCTGCCCGGCACCGAGGTCTGCCGCTCCCTCCGCCAGCGCTCCAACGTCCCGGTGATCATGCTCACCGCC
AAGGACAGCGAGATCGACAAGGTCGTCGGGCTGGAGCTCGGCGCGGACGACTACGTGACCAAGCCCTTCTCCTCAAGGGA
GCTGGTGGCCCGCATCCGCGCGGTGCTGCGCCGCCAGGGCGACGTGGAGGAGCTGGAGTCGGCCGTGCTGGCCGCCGGAC
CGGTCCGGATGGACGTGGACCGGCACATCGTCGCGGTCCGCGGTCAGCAGGTGCAGCTCCCCCTGAAGGAGTTCGAGCTG
CTGGAGGTCCTGCTGCGCAACGCCGGCCGGGTCCTCACCCGCGGACAGCTCATCGACCGTGTCTGGGGTGCCGACTACGT
GGGTGACACCAAGACCCTGGACGTGCACGTCAAGCGGCTGCGCGCCAAGGTCGAGTCCGACCCGTCCAACCCGCGCTGCA
TCCTCACCGTCCGCGGGCTGGGCTACAAGTTCGACCCCGCGGAGGACTGA

Protein sequence :
MTRVLVVEDEESFSDALSYMLRKEGFEVAVAATGPEALDTFDRNGADLVLLDLMLPGLPGTEVCRSLRQRSNVPVIMLTA
KDSEIDKVVGLELGADDYVTKPFSSRELVARIRAVLRRQGDVEELESAVLAAGPVRMDVDRHIVAVRGQQVQLPLKEFEL
LEVLLRNAGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRAKVESDPSNPRCILTVRGLGYKFDPAED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-25 43
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 3e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_0961 YP_003336708.1 response regulator receiver protein AE000516.2.gene3505. Protein 1e-37 50
Sros_0961 YP_003336708.1 response regulator receiver protein NC_012469.1.7685629. Protein 6e-45 48
Sros_0961 YP_003336708.1 response regulator receiver protein HE999704.1.gene2815. Protein 2e-41 47
Sros_0961 YP_003336708.1 response regulator receiver protein NC_002952.2859905.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_009782.5559369.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_002951.3237708.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_003923.1003749.p0 Protein 2e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_007622.3794472.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_002758.1121668.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_009641.5332272.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_013450.8614421.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_007793.3914279.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_002745.1124361.p0 Protein 1e-43 46
Sros_0961 YP_003336708.1 response regulator receiver protein NC_012469.1.7686381. Protein 8e-40 45
Sros_0961 YP_003336708.1 response regulator receiver protein BAC0125 Protein 4e-28 43
Sros_0961 YP_003336708.1 response regulator receiver protein AE015929.1.gene1106. Protein 6e-29 42
Sros_0961 YP_003336708.1 response regulator receiver protein AE016830.1.gene1681. Protein 4e-42 42
Sros_0961 YP_003336708.1 response regulator receiver protein HE999704.1.gene1528. Protein 2e-25 42
Sros_0961 YP_003336708.1 response regulator receiver protein BAC0308 Protein 1e-28 41
Sros_0961 YP_003336708.1 response regulator receiver protein BAC0638 Protein 5e-20 41
Sros_0961 YP_003336708.1 response regulator receiver protein CP000034.1.gene3671. Protein 8e-34 41
Sros_0961 YP_003336708.1 response regulator receiver protein CP001918.1.gene5135. Protein 5e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_0961 YP_003336708.1 response regulator receiver protein VFG1389 Protein 7e-29 44
Sros_0961 YP_003336708.1 response regulator receiver protein VFG1386 Protein 2e-27 43
Sros_0961 YP_003336708.1 response regulator receiver protein VFG0596 Protein 3e-25 43
Sros_0961 YP_003336708.1 response regulator receiver protein VFG1390 Protein 1e-30 42