Gene Information

Name : Sros_9155 (Sros_9155)
Accession : YP_003344518.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 10099967 - 10101469 bp
Length : 1503 bp
Strand : -
Note : KEGG: bsu:BSU00820 lysyl-tRNA synthetase

DNA sequence :
GTGACCGATGAAGTGACGAACCCAGCCGAGGATCTGCCCGAGCAGATGCGCGTGCGCCGGGAGAAGCTCGACCGCCTCCG
TTCCGAGGGCGTCGACCCCTACCCGGTGAATTTCCCGCGCACCGCGACCAACGGCGAGATCCGTGAGAAATACGCCGATC
TCGCCGCTGACACCGCGACCGGCGACCGGGTCGGCGTCACCGGACGGGTCATGCTGTCCAGGACCGGAGGCAAGCTCTGC
TTCGCCACGATCCGGGACGGCTCCGCCGACCTCCAGGTCATGATCTCCCTGGACAAGGTGGGCGAGGAGTCCCTGGCGGC
GTGGAAGCGCGACGTCGACCTCGGCGACCACGTCGGCATCGAGGGCGAGGTCATCACCTCCCGCCGGGGCGAGCTGTCCA
TCCTCGCCGACCGCTGGGCGATCACCTCCAAGTGCCTGCGCCCGCTGCCGGAGAAGCACGCCGGGCTCACCGACCCCGAG
GCGCGGGTCCGCCAGCGCTACCTGGACCTCATCGTCAACGACGAGGCGCGGAAGATGGCCTACACCCGTAGCGCCGTCGT
GCGGGCGATGCGTGACTTCTGGCACGGTGAGGGCTACCTCGAGGTCGAGACGCCGATGCTCCAGCCGATCCACGGCGGCG
CGACGGCCCGGCCGTTCAAGACCCACATCAACGCCTACAGCATGGAGCTCTACCTCCGCATCGCGATCGAGCTCTACCTC
AAGCGGCTCGTGGTGGGCGGCATCGAGAAGGTCTTCGAGATCAACCGCAACTTCCGCAACGAGGGCGCGGATGCCACCCA
CAACCCCGAGTTCACCATGCTCGAGGCCTACGGCACGTATCTCGACTACAACGACATGGCCGACCTGACCCAGCGGATGA
TCCAGAGCGCGGTCGTGGCCGCGCTCGGCCACTCCGTGGTGACCCACGAGGGCCAGGAGATCGACCTGGGCCTGCCGGAG
TGGCCGAGGATCACCCTCTACGGGTCGGTCTCGGAGGCGCTGGGCGAGGAGATCACCACCGAGACGCCGCTGGAGCACGT
CCGCAAGCACGCCGACGCGCACGAGATCCACTGGGACCCGAAGTGGGGCCAGGGCAAGCTCGTCCAGGAGATCTTCGAGG
CGCTCGTCGAGCACACCCTCATCCAGCCCACGTTCGTCATGGACTATCCGCTGGAGACCTCCCCGCTGACCCGCCAGCAT
CGGGACAACCCGCTCCTCACCGAGAAGTGGGACCTGATCGGCTTCGGCACCGAGCTCGGCACCGCCTACTCGGAGCTGGT
CGACCCGGTCGAGCAGCGCCGCCGCCTCACCGAGCAGTCCCTGCTCGCCGCGGGCGGCGACCCCGAGGCCATGCAGCTTG
ACGAGGACTTCCTGACCGCCCTGGAATACGCGATGCCGCCCACCGGTGGCATGGGGCTCGGCGTGGACCGTCTCGTCATG
GCCTTCACCGGCAAGAACATCCGCGAGACCATCCTGTTCCCGCTGGTCAAGCCGGCGGGCTGA

Protein sequence :
MTDEVTNPAEDLPEQMRVRREKLDRLRSEGVDPYPVNFPRTATNGEIREKYADLAADTATGDRVGVTGRVMLSRTGGKLC
FATIRDGSADLQVMISLDKVGEESLAAWKRDVDLGDHVGIEGEVITSRRGELSILADRWAITSKCLRPLPEKHAGLTDPE
ARVRQRYLDLIVNDEARKMAYTRSAVVRAMRDFWHGEGYLEVETPMLQPIHGGATARPFKTHINAYSMELYLRIAIELYL
KRLVVGGIEKVFEINRNFRNEGADATHNPEFTMLEAYGTYLDYNDMADLTQRMIQSAVVAALGHSVVTHEGQEIDLGLPE
WPRITLYGSVSEALGEEITTETPLEHVRKHADAHEIHWDPKWGQGKLVQEIFEALVEHTLIQPTFVMDYPLETSPLTRQH
RDNPLLTEKWDLIGFGTELGTAYSELVDPVEQRRRLTEQSLLAAGGDPEAMQLDEDFLTALEYAMPPTGGMGLGVDRLVM
AFTGKNIRETILFPLVKPAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 3e-124 52
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-91 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_9155 YP_003344518.1 lysyl-tRNA synthetase VFG1668 Protein 2e-91 41