Gene Information

Name : Sros_9148 (Sros_9148)
Accession : YP_003344512.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : class III stress response-related ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 10089996 - 10092503 bp
Length : 2508 bp
Strand : -
Note : KEGG: bha:BH0103 class III stress response-related ATPase

DNA sequence :
ATGTTCGAGAGGTTCACCGACCGCGCACGGCGGGTTGTCGTCCTGGCTCAAGAAGAGGCCCGGATGCTCAACCACAACTA
CATCGGTACGGAGCACATCCTTCTTGGTCTGATCCACGAAGGTGAAGGCGTTGCCGCCAAGGCTCTGGAGAGCCTCGGCA
TCAGTCTTGAAGGTGTGCGTCAGCAGGTCGAGGAGATCATCGGCCAGGGACAGTCTGCGCCGTCGGGGCACATTCCCTTC
ACCCCGCGCGCGAAGAAGGTCCTTGAGCTGTCGCTCCGCGAGGCCTTGCAGCTGGGACACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTCATCCGTGAGGGCGAGGGCGTCGCCGCCCAGGTGCTGGTGAAGCTGGGCGCGGATCTCAACCGCG
TGCGGCAGCAGGTCATCCAGTTGCTCCACGGCTACCAGGGCAAGGAGCCGGCCGCCGCGGGCGGCCCGCAGGAGGCCGCG
CCGTCGACCTCCCTTGTGCTGGACCAGTTCGGCCGCAACCTGACGCAGGCCGCCCGTGAGGGCAAGCTCGACCCGGTCAT
CGGCCGGGAGAAGGAGATCGAGCGGGTCATGCAGGTCCTCTCCAGGAGGACCAAGAACAACCCCGTCCTGGTGGGTGAGC
CCGGTGTCGGCAAGACCGCCGTCGTCGAAGGGCTGTCCCAGAAGATCGTCAAGGGCGAGGTCCCGGAGACGCTCAAGGAC
AAGCAGCTCTACACCCTGGACCTGGGCGCGCTGGTGGCGGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGTGGCGACATCATCCTGTTCATCGACGAGCTCCACACACTCGTCGGTGCGGGTGCCG
CCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGGGCGACCACC
CTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTCGAGCGCCGCTTCCAGCCGATCCAGGTGGCCGAGCCCAG
CCTCAGCCACACGATCGAGATCCTCAAGGGCCTGCGCGACCGTTACGAGGCGCACCACCGGGTCTCCATCACCGACGGCG
CCCTCGTGGCCGCCGCGCAGCTCGCCGACCGCTACATCAGCGACCGGTTCCTGCCCGACAAGGCGATCGACCTCATCGAC
GAGGCCGGCTCGCGCATGCGCATCCGCCGCATGACCGCGCCGCCGGACCTGCGTGAGTACGACGAGAAGATCGCCAACGT
GCGGCGCGACAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCCGCGCTGCGCGACCAGGAGAAGCAGCTCC
AGCTCAAGCGCGAGCGCCGCGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCACCGAGGAGCTCATC
GCCGAGGTCCTCGCCACGGCCACCGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGTCCCAGCGACTGCTCCGCATGGA
GGACGAGCTGCACAAGCGGATCATCGGCCAGGACGACGCCATCAAGGGTCTGTCCCGCTCGATCCGCCGTACGCGCGCCG
GTCTGAAGGACCCGCGCCGTCCGGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTCTCCAAG
GCGCTGGCCGAGTTCCTGTTCGGGGACGAGGACGCGCTGATCATGCTGGACATGTCCGAGTTCATGGAGAAGCACACCGT
CTCCCGGCTCTTCGGCTCTCCTCCCGGCTACGTCGGATACGAGGAGGGTGGCCAGCTCACCGAGAAGGTGCGGCGCAAGC
CGTTCTCCGTGGTCCTCTTCGACGAGATCGAGAAGGCCCACCCCGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACGCCCAGGGCCGCGTGGTGGACTTCAAGAACACCGTCATCATCATGACGACCAACCTCGGCACCCG
CGACATCTCCAAGGGGCAGGGCGTCGGGTTCGCGAAGTCCAACGACACCGAGTCGAACTACGACCGGATGAAGTCCAAGG
TCCAGGAGGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGTGTCGACGACATCGTGGTCTTCCACCAGCTCACG
CCGAAGGAGATCATCAAGATCGTGGACCTGATGCTCGCGCAGGTGGGCGAGCGTCTGAAGGACCGCGACATGGGTCTGGA
GGTCACCCAGGACGCCAAGCAGTTGCTGGCCGACCGTGGCTACGACCCGGTGATGGGCGCCCGTCCGCTCCGCCGCACCA
TCCAGCGTGAGCTGGAGGACTCGCTGTCGGAGAAGATCCTGTACGGCGAGCTCCGTCCCGGTCAGATCGTCAAGATCAGC
ATCGAGGGCGAAGGCGACAACGCGAAGTTCGTCTTCGTGGGTGAGGCCGCGCCTGCCGACCAGGTTCCGGACTCGGCGGC
CGCCATCGCGGAGCCGATCCAGAACTAG

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQSAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLHGYQGKEPAAAGGPQEAA
PSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLVGEPGVGKTAVVEGLSQKIVKGEVPETLKD
KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLSHTIEILKGLRDRYEAHHRVSITDGALVAAAQLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREYDEKIANVRRDKESAIDAQDFEKAAALRDQEKQLQLKRERREKEWKAGDMDVVAEVTEELI
AEVLATATGIPVFKLTEEESQRLLRMEDELHKRIIGQDDAIKGLSRSIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALIMLDMSEFMEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILED
GRLTDAQGRVVDFKNTVIIMTTNLGTRDISKGQGVGFAKSNDTESNYDRMKSKVQEELKQHFRPEFLNRVDDIVVFHQLT
PKEIIKIVDLMLAQVGERLKDRDMGLEVTQDAKQLLADRGYDPVMGARPLRRTIQRELEDSLSEKILYGELRPGQIVKIS
IEGEGDNAKFVFVGEAAPADQVPDSAAAIAEPIQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 74

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_9148 YP_003344512.1 class III stress response-related ATPase VFG0079 Protein 0.0 61
Sros_9148 YP_003344512.1 class III stress response-related ATPase VFG0080 Protein 2e-154 52