Gene Information

Name : Sros_0090 (Sros_0090)
Accession : YP_003335889.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 91356 - 92087 bp
Length : 732 bp
Strand : -
Note : KEGG: bam:Bamb_0222 ABC transporter

DNA sequence :
ATGAACGATGTGGTGCGTCTGGACGCGGTCAGCAAGGTTTACGGCAGGGGGCCGAACACGGTGTTCGCCCTGCGTGAGGT
GTCGGTCGGCATCCCCCACGGCAGCTTCACCGCCGTGATGGGCCCTTCGGGGTCGGGTAAGAGCACGTTCCTGCACTGCG
CTGCCGGGCTGGACCAGCCCTCCTCCGGCTCGGTACGGCTCGGCGGCACGGAGCTGGCGGGGATGAACGAGACGGAACTG
ACCGAACTACGGCGTAAGCGGATCGGTTTCGTCTTCCAGGCGTTCAACCTGGTCTCGTCCCTCACCGTGACGGAGAACAT
CACCCTCCCGCTGAGACTGGCCGGAGTCCGGGTGGACCGGGCCTGGCTTGAGGAGATCGTCGACCGGGTCGGGCTGGCCG
GCCGTACCGGGCACCGGCCCGGGGAGCTCTCCGGGGGGCAGCAGCAGCGGGTGGCGATCGCGCGGGCCCTGGTGACACGG
CCCGAGGTGGTCTTCGGCGACGAGCCGACCGGCGCGCTGGACACGATGACCGCGCGGGACGTGCTCACGCTGCTCCGCGA
AGTGGTCACCACCATGAGGCAGACCGTGGTGATGGTCACCCACGACCCGGTCGCCGCCTCCTACGCCGACACCGTCCTGT
TCCTCGCCGACGGCAACGTCGTCGACGCGATGGCCGCCCCCAGCGCGGAGAAGGTCGCCGACCGGATGACGCGGCTCGGA
GCGTGGGTGTGA

Protein sequence :
MNDVVRLDAVSKVYGRGPNTVFALREVSVGIPHGSFTAVMGPSGSGKSTFLHCAAGLDQPSSGSVRLGGTELAGMNETEL
TELRRKRIGFVFQAFNLVSSLTVTENITLPLRLAGVRVDRAWLEEIVDRVGLAGRTGHRPGELSGGQQQRVAIARALVTR
PEVVFGDEPTGALDTMTARDVLTLLREVVTTMRQTVVMVTHDPVAASYADTVLFLADGNVVDAMAAPSAEKVADRMTRLG
AWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_0090 YP_003335889.1 ABC transporter CP001581.1.gene598.p Protein 2e-43 49
Sros_0090 YP_003335889.1 ABC transporter NC_008702.1.4606598. Protein 3e-37 47
Sros_0090 YP_003335889.1 ABC transporter CP001581.1.gene798.p Protein 5e-41 45
Sros_0090 YP_003335889.1 ABC transporter NC_012469.1.7686878. Protein 1e-39 44