Gene Information

Name : Sros_8520 (Sros_8520)
Accession : YP_003343906.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 9400855 - 9401529 bp
Length : 675 bp
Strand : +
Note : KEGG: sat:SYN_00981 response regulator

DNA sequence : 
GTGGCCGGCATCCTCCTTGTTGAAGACGATCCCTCGGTCCGGACCGGGCTCGAGCTGGCGCTGGCACGCCAGGGCCACTC
CGTGACCTCCTACGCCAGCGGCGAGGAGGCGCTCGACCACATCCGGTCGCGCCGTCCGGAGATCGTCATCCTCGACGTCA
TGCTCCCCGGGATCGACGGGGTCGAGGTGTGCCGTCGCATCCGCAAGATGGACCAGTTGCCGGTCATCCTTCTCACCGCC
AGGGGCGACGACCTCGACGTGGTCGTGGGACTGGAGGCGGGAGCCGACGACTACGTGGTCAAGCCGGTCGAGCCGCGCGT
GCTGGACGCCCGGATCCGCGCCGTCCTGCGCCGGGTGGAGTCGGTCGCCTCCGACCGCATCACCTTCGGCGACCTGGTGG
TCGACCGGGGGGCGCTCAAGGTGTCACTGGCCGGCCGGGAGATCCACCTGACCCCCACCGAGCTGCGGCTCCTGCTCGAA
CTGGTCCGCCATCCCGGCCAGGTGCTCAACCGCCGATACCTGCTGCGGGCCGTCTGGGACCACACCCACGTCGCCGACTC
CCGGCTGGTGGACGCCTGCGTCCAGCGGGTCCGCGCCAAGATCGAGTCGGTGCCGGCCGAGCCCGACTTCATCCACACCG
TCCGCGGATTCGGCTACCGGTTCAGCCCGCCGTGA

Protein sequence : 
MAGILLVEDDPSVRTGLELALARQGHSVTSYASGEEALDHIRSRRPEIVILDVMLPGIDGVEVCRRIRKMDQLPVILLTA
RGDDLDVVVGLEAGADDYVVKPVEPRVLDARIRAVLRRVESVASDRITFGDLVVDRGALKVSLAGREIHLTPTELRLLLE
LVRHPGQVLNRRYLLRAVWDHTHVADSRLVDACVQRVRAKIESVPAEPDFIHTVRGFGYRFSPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-26 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_8520 YP_003343906.1 response regulator receiver protein AE000516.2.gene3505. Protein 4e-34 46
Sros_8520 YP_003343906.1 response regulator receiver protein BAC0197 Protein 9e-23 42
Sros_8520 YP_003343906.1 response regulator receiver protein NC_002951.3237708.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_003923.1003749.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_002758.1121668.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_009641.5332272.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_013450.8614421.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_007793.3914279.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_002745.1124361.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein NC_009782.5559369.p0 Protein 4e-32 41
Sros_8520 YP_003343906.1 response regulator receiver protein CP000034.1.gene3671. Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_8520 YP_003343906.1 response regulator receiver protein VFG1390 Protein 4e-26 44
Sros_8520 YP_003343906.1 response regulator receiver protein VFG1563 Protein 4e-26 42
Sros_8520 YP_003343906.1 response regulator receiver protein VFG1702 Protein 1e-26 42