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Name : Sros_7988 (Sros_7988) Accession : YP_003343386.1 Strain : Streptosporangium roseum DSM 43021 Genome accession: NC_013595 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 8801364 - 8802146 bp Length : 783 bp Strand : + Note : KEGG: rsh:Rsph17029_3058 ABC transporter DNA sequence : GTGAGACTGCAAGCCGTCGACGTCAGGCTGGGCTACGGCGACCGTGTCATCGTCGACGGCCTCGATCTCGGGATCGAGGC CGGAACGGTGACCACGATCATCGGGCCGAACGGGTGTGGCAAGTCCACGCTGCTGCGCGCGCTGGGACGGCTGCTCCGGC CGTCGGGCGGCGAGGTCCTCCTGGACGGCAAGCGCATCGACAGGATGCCCACCAAGGAGGTCGCCAAGGTCCTCGGCGTG CTGCCGCAGGCTCCGACGGCCCCGGAGGGGCTGACCGTGGCCGACCTGGTGGCCCGGGGACGGCACCCGCACCAGACGTG GTACCGGCAGTGGTCCTCCGACGACGAGGCGGCGGTCAGCGAGGCTCTGGCCATGACCGGCCTGCTCGAGCTGGGCGAGC GCCCGCTGGACGAGCTGTCCGGCGGGCAGCGCCAGCGGGCGTGGATCTCGATGGCCCTCGCCCAGGGCACCGACCTGCTC CTGCTCGACGAGCCCACGACCTTCCTCGACCTGGCCCACCAGGTCGAGGTCCTGGAGCTGGTCCGCAGGCTCCACGGCGA GCTCGGCCGCACCGTGGTGATGGTCCTGCACGACCTCAACCTGGCCGCCCGCTACGCCGACCGCCTGGTCGCCATGCGCG GCGGCAAGGTCATCGCCGCCGGGCCGCCGCACGAGGTCCTCACCGAGCCCCTCCTCGCGGAGGTCTTCGACCTGGACGCC AAGGTGATCGAGGACCCCGTAGCCGGAACCCCCCTGGTCGTCCCGGTCGGCGTGCGCCACTAG Protein sequence : MRLQAVDVRLGYGDRVIVDGLDLGIEAGTVTTIIGPNGCGKSTLLRALGRLLRPSGGEVLLDGKRIDRMPTKEVAKVLGV LPQAPTAPEGLTVADLVARGRHPHQTWYRQWSSDDEAAVSEALAMTGLLELGERPLDELSGGQRQRAWISMALAQGTDLL LLDEPTTFLDLAHQVEVLELVRRLHGELGRTVVMVLHDLNLAARYADRLVAMRGGKVIAAGPPHEVLTEPLLAEVFDLDA KVIEDPVAGTPLVVPVGVRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 2e-71 | 61 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 1e-61 | 47 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 1e-61 | 47 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 8e-62 | 47 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 8e-62 | 47 |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 3e-53 | 46 |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 2e-64 | 46 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 2e-64 | 46 |
| CDCE8392_1767 | YP_005134301.1 | iron complex transport system ATP-binding protein | Virulence | Not named | Protein | 1e-38 | 45 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 2e-52 | 44 |
| ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 9e-52 | 43 |
| ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 9e-52 | 43 |
| ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 9e-52 | 43 |
| ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 9e-52 | 43 |
| irp6C | YP_005124377.1 | ATP-binding protein Irp6C | Virulence | Not named | Protein | 2e-31 | 41 |
| irp6C | NP_938506.1 | ATP-binding protein Irp6C | Not tested | Not named | Protein | 1e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sros_7988 | YP_003343386.1 | ABC transporter | BAC0164 | Protein | 2e-53 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sros_7988 | YP_003343386.1 | ABC transporter | VFG0925 | Protein | 2e-66 | 52 |
| Sros_7988 | YP_003343386.1 | ABC transporter | VFG1042 | Protein | 2e-53 | 46 |
