Gene Information

Name : Sros_7746 (Sros_7746)
Accession : YP_003343158.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8543826 - 8544626 bp
Length : 801 bp
Strand : -
Note : KEGG: pla:Plav_1100 ABC transporter

DNA sequence : 
ATGCCGCATACGACTTCGCGTCACGCCCTCGAACTCCATGAGGTGGTCAAGCGCCACGGGCACGGCGATGCCGTCGTGAC
CGCGCTGGACAGGGTGACGATGTCCATCCCGCGTGGCACCTTCACCGCGGTGATGGGGCCGTCGGGGTCGGGGAAGAGCA
CCCTGCTGCACTGCGCCGCCGGGCTTGACCGGCCGACCTCCGGATCCGTGGTTCTGGACGGCCACGAGCTGAGCGACCTG
GACGAAACGGCGCTGACCCGGCTGCGGCGCGACCGCATGGGATTCATCTTCCAGTCGTTCAACCTCGTGCCGACGCTGAC
GGTGGCGCAGAACGTGGCCCTCCCCCTTGAGTTCGCCGGCCGCCAGCCCGACGAGCGGGCCGTACGGGCGTTGCTCGCGC
GGCTGGGGCTCGCCGAGCGGGCCGATCATCGGCCGGCGGAGCTGTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGC
GCCGTGCTCTCCCGGCCCGCCGTCGTCTTCGCGGACGAACCCACCGGCGCGCTGGACACCCAGGCCGCACGCGACGTGCT
CGGCATCCTGCGCGAGGCGGTGACCCTGACCCAGCAGACGATCGTCATGGTGACCCACGACCCGGTTGCCGCCTCCTATG
CCGACACGGTGGTGTTCTTCGCCGACGGGCGGATCGTGGACACCATGTCGCGGCCGAACCCCGAGGCGGTGGCCGCGCGG
ATGGCCCGGCTGTCCGCGCCGGACCGGTCCGCCGGGCCGGCGGACGCGGCGCCGGGCCGCCGGGACGGTGGTCTCCGATG
A

Protein sequence : 
MPHTTSRHALELHEVVKRHGHGDAVVTALDRVTMSIPRGTFTAVMGPSGSGKSTLLHCAAGLDRPTSGSVVLDGHELSDL
DETALTRLRRDRMGFIFQSFNLVPTLTVAQNVALPLEFAGRQPDERAVRALLARLGLAERADHRPAELSGGQQQRVAIAR
AVLSRPAVVFADEPTGALDTQAARDVLGILREAVTLTQQTIVMVTHDPVAASYADTVVFFADGRIVDTMSRPNPEAVAAR
MARLSAPDRSAGPADAAPGRRDGGLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_7746 YP_003343158.1 ABC transporter CP001581.1.gene598.p Protein 2e-41 48
Sros_7746 YP_003343158.1 ABC transporter CP001581.1.gene798.p Protein 9e-41 48
Sros_7746 YP_003343158.1 ABC transporter NC_008702.1.4606598. Protein 1e-33 45
Sros_7746 YP_003343158.1 ABC transporter NC_012469.1.7686878. Protein 2e-37 43