Gene Information

Name : Sros_7502 (Sros_7502)
Accession : YP_003342927.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 8299013 - 8300461 bp
Length : 1449 bp
Strand : +
Note : KEGG: pla:Plav_1786 aldehyde dehydrogenase

DNA sequence :
ATGGCCACTGTCGCCGGCGTCGCAGTCGAGGGCGGTCACTGGATCGGAGGCGAGCGGGTCTCCTCACCCGCGACGTTCGA
GGACGTCTCGCCGATCGACGGTCAGGTGATCGCGGAGATCGCCAGGGGCGGAGCCGAGGAGGCGGACGCCGCCGTCAGGG
CAGCCGAGGCGGCTTTCCCCGCCTGGTCGCGGACCAGCCGGGAGGAACGGGCCCGCCTGCTCCACGCCGTCGCCGACGGC
GTGGAGAAGCGGCTGGAGCAGCTCGCGATCGTGGAGACGACCGACAACGGCGCGCTGCTCCGCTCCCATCTGCGCGGTGT
GATGCCGCGGGTCGCGCACAACTTCCGGTTCTTCGCCGACCGGCTGCTGGAGCTGGGACACGAGGACTTCGACACCCGCG
GCCACCGCAACCACGTGAGCTGGGACCCGGCCGGCGTCTGCGCGCTGATCACGCCGTGGAACGCCCCCCTGATGCTGGCC
ACCTGGAAGATCGCCCCGGCGCTGGCCGCGGGCAACACCGTGGTGCTCAAGCCCGCCGAGTGGACCCCGCTGACCGCCTC
CCTGCTGGCCGACATCACCGCCGAGGCCGGACTGCCCGCCGGCGTGTTCAACGTGGTCCAAGGCTACGGCGAGGAGGTCG
GCGCGGCCCTGGTCGCCCACCCCGGCGTCCGGCGGATCAGCTTCACCGGCTCGGTCCCGACCGCCCGGCACATCTCCGCC
GCCGCAGCGGCCCACCTGACCCCGCTCTCCCTGGAGCTGGGCGGCAAGTCCCCGCTCGTCGTGTTCGCCGACGCCGACCT
GGACCTGGCCGTCGACCTCGCCGTCGAGCAGTACGACAACGCCGGGCAGGTCTGCCTGGCCGGGACCCGGCTGCTGGTCG
AGGAGTCGATCGCCGAGGAGTTCACCGCCCGGTTCGCCGCCAGGGCCGGCGCCCTCACGCAGGGCGACCCGCGCGACCTG
GCGACCGACATCGGCCCGAACATCCACCCCGAGCACTTCGCGCGGATCGACGGCTTCGTACGGCGGGCGCTCGACGCCGG
GGCCACGGCGGTCGTCGGCGGCGGCCCCAACACCGACCTCGGCGGCCTGTACTACCGGCCGACCCTGTTCACCGGCGTCG
CGGCCGACAGCGAGATCGTCAACGAGGAGGTCTTCGGGCCGGTCCTCACCCTGCAGACCTTCCGCACCGAGGAGCAGGCC
GTCGAGATGGCCAACTCCACCCGCTTCGGCCTGTCGGCCACCCTGGTGACCGGCTCCGAGGAGCGCGCGGCCCGGGTCAC
CGAGCGCCTGGTGGCGGGCACCGTCTGGGTGAACTGCTTCTTCGTGCGCGACCTCAAGGCCCCGTTCGGCGGTTCCCGCC
AGTCCGGCGTCGGCCGCGAGGGCGGCGACTGGAGCTTCGACTTCTACTGCGACCTCAAGAACACGGTGACCGCGCCATGG
GCGAAGTAG

Protein sequence :
MATVAGVAVEGGHWIGGERVSSPATFEDVSPIDGQVIAEIARGGAEEADAAVRAAEAAFPAWSRTSREERARLLHAVADG
VEKRLEQLAIVETTDNGALLRSHLRGVMPRVAHNFRFFADRLLELGHEDFDTRGHRNHVSWDPAGVCALITPWNAPLMLA
TWKIAPALAAGNTVVLKPAEWTPLTASLLADITAEAGLPAGVFNVVQGYGEEVGAALVAHPGVRRISFTGSVPTARHISA
AAAAHLTPLSLELGGKSPLVVFADADLDLAVDLAVEQYDNAGQVCLAGTRLLVEESIAEEFTARFAARAGALTQGDPRDL
ATDIGPNIHPEHFARIDGFVRRALDAGATAVVGGGPNTDLGGLYYRPTLFTGVAADSEIVNEEVFGPVLTLQTFRTEEQA
VEMANSTRFGLSATLVTGSEERAARVTERLVAGTVWVNCFFVRDLKAPFGGSRQSGVGREGGDWSFDFYCDLKNTVTAPW
AK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 9e-68 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-56 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_7502 YP_003342927.1 betaine-aldehyde dehydrogenase VFG0082 Protein 5e-59 41