Gene Information

Name : Sros_7376 (Sros_7376)
Accession : YP_003342805.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8141461 - 8142303 bp
Length : 843 bp
Strand : -
Note : KEGG: rme:Rmet_1041 lipoprotein releasing system, ATP-binding protein

DNA sequence :
ATGAGTGTTGTTCTTGAAGGGACCGGCCTGGTCAAGCGGTTCGGCCCGACCGTGGCGCTGGGCGGCGTCGGGCTGGCCGT
CCACACCGGCGAGGCAGTGGCGATCATGGGACCGAGCGGGTCGGGCAAGTCGACCCTGTTGCACTGCCTCGCCGGGATCA
TGAAGCCGGACGCGGGCGAGGTCCACCTGCTCGGCCTGCGCATCGACGCGATGGGGGAGCGGCAGCGCAGCGCCCTGCGC
CGTACCCGGTTCGGGTTCGTGTTCCAGTTCGGCCAGCTCCTGCCGGAGCTCCCGGCCGAGGAGAACGTCGCGCTGCCTCT
CATGCTCGGCGGCGTCTCCCGGGCCGACGCCGTACGGCAGGCCCGCGAGTGGTTCGGCCCGCTCGGGCTCGGAGGCATGG
AGGGCCGCCGCCCCGGCGAGCTCTCCGGCGGTCAGGCGCAGCGGGTGGCGATCGCCCGCGCGCTGGTCACCCGGCCCGCG
GTGATCTTCGCCGACGAGCCGACCGGCGCGCTCGACCAGAGCACCGGCCACGACACGATGCGCCTGCTGGTGGAGGCCAC
CAAGCACAACGGGGCCTCGCTGGTGGTCGTCACCCACGACCACCAGGTGGCCCGGTGGTGTGACCGCGTGACCGAGGTCC
GCGACGGCCGGATCCTCCCCGGCCAGGACGTCACGCGGCCTCCCGCCGGACACGACCCGCACCTCTCCGCCGGTCACGGC
GCCCACCCCTCCGCCGGTCACGACCCGCGCCCCTCCGCCGGTCACGACCCGCGGCACCCGGCCCCCGGCCAGGACGTCAC
GCGGGAGCCGGCGACCCGGATCCTTCCCGGGGTGACCGGGTGA

Protein sequence :
MSVVLEGTGLVKRFGPTVALGGVGLAVHTGEAVAIMGPSGSGKSTLLHCLAGIMKPDAGEVHLLGLRIDAMGERQRSALR
RTRFGFVFQFGQLLPELPAEENVALPLMLGGVSRADAVRQAREWFGPLGLGGMEGRRPGELSGGQAQRVAIARALVTRPA
VIFADEPTGALDQSTGHDTMRLLVEATKHNGASLVVVTHDHQVARWCDRVTEVRDGRILPGQDVTRPPAGHDPHLSAGHG
AHPSAGHDPRPSAGHDPRHPAPGQDVTREPATRILPGVTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_7376 YP_003342805.1 antimicrobial peptide ABC transporter ATPase-like protein NC_012469.1.7686878. Protein 7e-37 47