Gene Information

Name : Sros_6168 (Sros_6168)
Accession : YP_003341641.1
Strain : Streptosporangium roseum DSM 43021
Genome accession: NC_013595
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 6767682 - 6769331 bp
Length : 1650 bp
Strand : +
Note : KEGG: aeh:Mlg_0184 urease subunit alpha

DNA sequence :
ATGAGCATGTACGGCCCGCGTAAGGGAGACCGGGTCAGGCTCGGCGACTCCGGCCTGGTGGTCGAGGTCGAGCACGACTC
GCAGAAGGCCGGGGAGGAGTTCCTGGCCGGGTTCGGCAAGACCGCCCGGGACGGCCTGCACCTGAAGGCCGCCTCGATCA
GGGACACCTGCGACCTGGTGATCAGCAACGTGCTGATCCTCGACCCGATCCTGGGCGTGCGGACCGCGTCGATCGGCGTC
CGGGAGGGGCGCGTCCACGCCGTCGGCCGGGCCGGCAACCCCGACACCCTGGACGGGGTGGACGTGGTGGTCGGCACCGG
GACCACGATCGTGTCCGGTGAGGGGCTCATCGCGACGGCGGGGGCGATCGACACCCACGTCCACCTGCTCAGCCCGCGCA
TCATGGAGGCCTCCCTGGCCTCCGGCGTCACCACGATCATCGGCCAGGAGTTCGGGCCGGTCTGGGGCGTGGGGGTGAAC
TCGCCGTGGGCCCTGCGGCACGCGTTCAACGCCTTCGACGCCTGGCCGGTGAACATCGGCTTCCTGGCGCGCGGCTCGTC
CTCACACGAGGCTCCGCTGGTCGAGGCGCTGGTCGAGGGCGGTGCGAGCGGCTTCAAGGTGCACGAGGACATGGGGGCCC
ACACCCGCGCGCTGGACACCGCGCTGCGGGTCGCCGAGGAGCACGACGTGCAGGTGGCCCTGCACACCGACGGTCTCAAC
GAGTGCCTGTCGGTGGAGGACACCCTCGCCGTGCTCGGAGGCCGGACGATCCACGCCTTCCACATCGAGGGCTGCGGCGG
CGGTCACGTGCCGAACGTGCTCAAGCTGGCCGGGGTGGCCAACGTCATCGGCTCCTCCACCAACCCGACGCTGCCCTTCG
GCCGGGACGCCGTCGCCGAGCACCACGGGATGATCGTCTCGGTGCACGGGCTCCGGCCCGAGCTGCCGGGGGACGCCGCG
CTGGCCAGGGACCGGATCCGGGCCGGCACCATGGGCGCCGAGGACGTGCTGCACGACCTCGGGGTCATCGGCATCACCTC
CTCCGACGCGCAGGGCATGGGCCGGGCGGGCGAGACGGTCCGCCGGACGTTCGCAATGGCCGGGAAGATGAAGGGGGAGC
TGGGCGCGCCGGAGCGCAACGACAACGAGCGGGTGCTGCGCTACCTGGCCAAACTGACGATCAACCCGGCCATCGCGCAC
GGCCTGGCCCACGAGGTCGGCTCGCTGGAGCCGGGCAAGCTGGCCGACATCGTGCTGTGGCGGCCGGACCACTTCGGCGC
CAAGCCGCAGCTCGTGCTGAAGGCGGGCTTCCCCGCCTACGGCGTGACCGGGGACCCGAACGCCTCCACCGACACCTGCG
AGCCGCTGGTGCTGGGCCCGCAGTTCGGCGCGTACGGCGCGACCGCCGCGGACCTGTCGGTGGCCTTCGTCAGCGGGGCG
GCCGCGGACGCGGCCGACGACCGCATGACGACCCGCCGCCGCCGGGTGGGGGTGCGCGGCACCCGCGGCATCGGCCCCGG
CGACCTGGTCCTCAACTCCCGGCTCGGGTCCGTCGAGGTGGACACTCTCGGCCAGGTCACCCTCGACGGCGACCCGGTCC
GGTCGGCCCCCGCCGACTCGGTCTCGCTGAGCCGCCTGTACTTCCTGTGA

Protein sequence :
MSMYGPRKGDRVRLGDSGLVVEVEHDSQKAGEEFLAGFGKTARDGLHLKAASIRDTCDLVISNVLILDPILGVRTASIGV
REGRVHAVGRAGNPDTLDGVDVVVGTGTTIVSGEGLIATAGAIDTHVHLLSPRIMEASLASGVTTIIGQEFGPVWGVGVN
SPWALRHAFNAFDAWPVNIGFLARGSSSHEAPLVEALVEGGASGFKVHEDMGAHTRALDTALRVAEEHDVQVALHTDGLN
ECLSVEDTLAVLGGRTIHAFHIEGCGGGHVPNVLKLAGVANVIGSSTNPTLPFGRDAVAEHHGMIVSVHGLRPELPGDAA
LARDRIRAGTMGAEDVLHDLGVIGITSSDAQGMGRAGETVRRTFAMAGKMKGELGAPERNDNERVLRYLAKLTINPAIAH
GLAHEVGSLEPGKLADIVLWRPDHFGAKPQLVLKAGFPAYGVTGDPNASTDTCEPLVLGPQFGAYGATAADLSVAFVSGA
AADAADDRMTTRRRRVGVRGTRGIGPGDLVLNSRLGSVEVDTLGQVTLDGDPVRSAPADSVSLSRLYFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-79 48
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 1e-85 48
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 1e-85 48
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-79 48
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-79 48
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-79 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sros_6168 YP_003341641.1 urease VFG0270 Protein 9e-86 48